LIttoral ENvironnement et Sociétés (LIENSs) - UMR 7266

Activité

Thierry Guyot — 2018-09-27T09:32:34Z

Les activités du plateau technique de Biologie Moléculaire permettent de mener des travaux dans un secteur de recherche novateur qu'est la génomique environnementale. La génomique environnementale permet de mieux comprendre le fonctionnement des organismes dans leur écosystème, ceci grâce à l'analyse de la séquence des gènes, génomes, transcriptomes. La plateforme Biologie Moléculaire est utilisée pour des activités de recherche fondamentale impliquant des chercheurs du laboratoire LIENSs mais également du CEBC. Elle est également impliquée dans des travaux de recherche appliquée liés à la surveillance des littoraux, en collaboration avec l'observatoire OBIONE et le Port de Plaisance de la Rochelle pour des suivis de biodiversité

Activités du plateau de Biologie Moléculaire :

Développement de marqueurs moléculaires (nucléaires et mitochondriaux) pour des études de génétique et génomique des populations.

Préparation de banques d'acides nucléiques avant séquençage NGS

Mise au point de protocoles d'analyses en PCR quantitative pour l'étude de gènes fonctionnels.

Barcoding moléculaire.

Étude de la diversité bactérienne et archéenne au sein des écosystèmes littoraux (marais salants, marais doux, vasières, estuaires).

Caractérisation de la diversité virale au sein des environnements aquatiques.

Caractérisation fonctionnelle des communautés procaryotes dans les écosystèmes marins (vasières, estuaires).

Equipements

Thierry Guyot — 2018-09-21T12:23:10Z

Postes de travail et principaux équipements

Le plateau de Biologie Moléculaire est réparti sur 3 laboratoires permettant le respect de "la marche en avant " des échantillons :

Salle Préparation des échantillons (L212)

Extraction des acides nucléiques (ADN et ARN) issus de modèles eucaryotes et procaryotes
Fast-prep 24, MP Biomedicals
Agitateur thermique, Grant-bio
Centrifugeuses réfrigérées pour microtubes, Eppendorf

Préparation de banques d'acide nucléiques
HulaMixer Sample Mixer, Invitrogen
Portoir magnétique Magna-rack 12 microtubes, Invitrogen
Electrophorese séparateur de fragments, Pippin Prep, Ozyme

Salle PCR et qPCR (L214)

4 thermocycleurs à gradient de température (Sensoquest labcycler et TC 5000 de TECHNE)
2 qPCR MX3005p, Stratagene

Salle post-PCR (L216)

Qualité et dosage des acides nucléiques
Nanodrop 2000, Thermoscientific
Qubit fluorometer, Invitrogen
Centrifugeuse pour microplaques, Eppendorf

Séparation des fragments et visualisation
Acquisiteur image Uvidoc HD6, UVITEC
Système de détection de mutation, Dcode Universal Mutation Détection System Bio-rad
Système d'électrophorese en champ pulsé (PFGE), CHEF-DR III Bio-rad
Système d'électrophorèse automatisé, Pippin Prep Ozyme

Stockage des échantillons
congélateur -80°C
système de lecture 2D pour référencement des échantillons (lecteur de tube et plaques)

Analyse des protéines
Système de Western blot composé d'un système d'électrophorèse vertical et d'une unité de transfert TE 70, Amersham

Matériel dédié à l'analyse des protéines, bâtiment Marie Curie

Système automatisé de transfert de gel sur membrane Transblot, Biorad
Système d'électrophorèse DODECAN Cell, Biorad
Focalisateur i12 IEF cell, Biorad
Système d'électrophorèse mini-protean 4 (Biorad) et d'électrotransfert pour western-blot
Système de digitalisation des gels (mini et grand gel) Chemidoc (Biorad) associé au pilotage par les logiciels PDQUEST (analyse de gels 2D) et imagelab : multiples détections (chromophores, fluorescence, chimiluminescence)
Mini-système de digitalisation des gels pour mini-gels GelDoc EZ imager (Biorad)

Publications

Thierry Guyot — 2018-05-16T09:06:26Z

2020
Saltaji, S., Rué, O., Sopena, V., Sablé, S., Tambadou, F., Didelot, S., Chevrot, R., 2020, Lactococcus lactis Diversity Revealed by Targeted Amplicon Sequencing of purR Gene, Metabolic Comparisons and Antimicrobial Properties in an Undefined Mixed Starter Culture Used for Soft-Cheese Manufacture, Foods, pp. 622.

2019
Pante, E., Becquet, V., Viricel, A., Garcia, P., 2019,Investigation of the molecular signatures of selection on ATP synthase genes in the marine bivalve Limecola balthica, Aquatic Living Resources, pp. 3.

2018
Breitwieser, M., Becquet, V., Thomas-Guyon, H., Pillet, V., Sauriau, P.-G.,
Graber, M., Viricel, A., 2018, Population structure and genetic diversity in
the variegated scallop, Mimachlamys varia (Linnaeus, 1758), a novel
bioindicator of chemical pollution on the French coastline, Journal of Molluscan Studies, pp. 417-425.

Hugoni, M., Escalas, A., Bernard, C., Nicolas, S., Jézéquel, D., Vazzoler, F.,
Sarazin, G., Leboulanger, C., Bouvy, M., Got, P., Ader, M., Troussellier, M.,
Agogué, H., 2018, Spatiotemporal variations in microbial diversity across the three domains of life in a tropical thalassohaline lake (Dziani Dzaha, Mayotte Island), Molecular Ecology, pp. 4775-4786.

Lavergne C., Hugoni M., Dupuy C., and Agogué H. (2018). First evidence of the presence and activity of archaeal C3 group members in an Atlantic intertidal mudflat. Scientific Reports, 8, 11790

Lavergne, C., Hugoni M., Hubas C., Debroas D., Dupuy, C., and Agogué, H. (2018). Diel Rhythm Does Not Shape the Vertical Distribution of Bacterial and Archaeal 16S rRNA Transcript Diversity in Intertidal Sediments : a Mesocosm Study. Microbial Ecology. 75, 364-374

Louis, M., Simon-Bouhet, B., Viricel, A., Lucas, T., Gally, F., Cherel, Y.,
Guinet, C., 2018, Evaluating the influence of ecology, sex and kinship on the
social structure of resident coastal bottlenose dolphins, Marine Biology, pp. 80.

Salsano, C., Didelot, S., Tambadou, F., Caradec, T., Sopena, V., Barthélémy, C., Thiery, V., Chevrot, R., 2018, Complete Genome Sequence of the Polymyxin E (Colistin)-Producing Paenibacillus sp. Strain B-LR”,”Génome complet du Paenibacillus B-LR producteur de colistine, Microbiology Resource Announcements.

Torres, L., Welch, A., Zanchetta, C., Chesser, R., Manno, M., Donnadieu, C.,
Bretagnolle, V., Pante, E., 2018, Evidence for a duplicated mitochondrial region in Audubon's shearwater based on MinION sequencing, Mitochondrial DNA Part A, pp. 256-263.

Viricel A, Becquet V, Dubillot E, Pante E (2018) De novo assembly and functional annotation of the transcriptome of Mimachlamys varia, a bioindicator marine bivalve. Marine Genomics

2017
Breitwieser, M., Viricel, A., Churlaud, C., Guillot, B., Martin, E., Stenger, P.-L.,
Huet, V., Fontanaud, A., Thomas-Guyon, H., 2017, First data on three bivalve species exposed to an intra-harbour polymetallic contamination (La Rochelle, France), Comparative Biochemistry and Physiology - Part C : Comparative Pharmacology and Toxicology, pp. 28 - 37.

Jauffrais, T., Agogué, H., Gemin, M−P., Beaugeard, L., Martin−Jézéquel, V. 2017. Effect of bacteria on growth and biochemical composition of two benthic diatoms Halamphora coffeaeformis and Entomoneis paludosa. Journal of Experimental Marine Biology and Ecology. 495:65−74.

Lavergne C , Agogué H, Leynaert A, Raimonet M, De Wit R, Pineau P, Bréret M, Lachaussée N, Dupuy C (2017) Factors influencing prokaryotes in an intertidal mudflat and the resulting depth gradients. Estuarine, Coastal and Shelf Science, Elsevier, 189, pp.74 - 83. 〈10.1016/j.ecss.2017.03.008〉

Leboulanger C, Agogué H, Bernard C, Bouvy M, Carré C, Cellamare M, Duval C, Fouilland E, Got P, Intertaglia L, Lavergne C, Le Floc'H E, Roques C, Sarazin G (2017) Microbial Diversity and Cyanobacterial Production in Dziani Dzaha Crater Lake, a Unique Tropical Thalassohaline Environment. PLoS ONE, Public Library of Science, 2017, 12 (1), pp.e0168879.〈10.1371/journal.pone.0168879〉

Moncaleano-Nino A, Barrios-Latorre S, Poloche-Hernandez J, Becquet V, Huet V, Villamil L, Thomas-Guyon H, Ahrens M, Luna-Acosta A (2017) Alterations of tissue metallothionein and vitellogenin concentrations in tropical cup oysters (Saccostrea sp.) following short-term (96h) exposure to cadmium. Aquatic Toxicology, doi:10.1016/j.aquatox.2017.02.011.

Pante E, Poitrimol C, Saunier A, Becquet V, Garcia P (2017) Putative sex-linked heteroplasmy in the tellinid bivalve Limecola balthica (Linnaeus, 1758). Journal of Molluscan Studies 83 (1) . doi :/10.1093/mollus/eyw038

2016

Breitwieser M*,Viricel A*, Graber M, Murillo L, Becquet V, Churlaud C, Fruitier-Arnaudin I, Huet V, Lacroix C, Pante E, Le Floch S, Thomas-Guyon H (2016) Short-term and long-term biological effects of chronic chemical contamination on natural populations of a marine bivalve. PLoS ONE 11(3):e0150184. doi : 10.1371/journal.pone.0150184 (* equal contribution).

Dessier, A., Dupuy, C., Trancart, T., Audras, A., Bustamante, P., Gérard, C., 2016. Low diversity of helminth parasites in Sardina pilchardus and Engraulis encrasicolus (Clupeidae) from the Bay of Biscay. Marine and Freshwater Research,.

Viricel, A., Simon-Bouhet, B., Ceyrac, L., Dulau-Drouot, V., Berggren, P.,
Amir, O., Jiddawi, N., Mongin, P., Kiszka, J., 2016, Habitat availability and
geographic isolation as potential drivers of population structure in an oceanic dolphin in the Southwest Indian Ocean, Marine Biology.

2015

Ben Henda, Y., Laamari, M., Lanneluc, I., Travers, M.A., Agogué, H., Arnaudin, I., Bridiau, N., Maugard, T., Piot, J.M., Sannier, F., Bordenave-Juchereau, S., 2015. Di and tripeptides from marine sources can target adipogenic process and contribute to decrease adipocyte number and functions. Journal of Functional Foods 17, 1-10.

Hugoni, M., Agogué, H., Taib, N., Domaizon, I., Moné, A., Galand, P., Bronner, G., Debroas, D., Mary, I., 2015. Temporal Dynamics of Active Prokaryotic Nitrifiers and Archaeal Communities from River to Sea. Microbial Ecology 70, 473-483.

Lanneluc, I., Langumier, M., Sabot, R., Jeannin, M., Refait, P., Sablé, S., 2015. On the bacterial communities associated with the corrosion product layer during the early stages of marine corrosion of carbon steel. International Biodeterioration and Biodegradation 99, 55-65.

Louis, M., Gally, F., Barbraud, C., Béesau, J., Tixier, P., Simon-Bouhet, B.,
Le Rest, K., Guinet, C., 2015, Social structure and abundance of coastal bottlenose dolphins, Tursiops truncatus, in the Normano-Breton Gulf, English Channel, Journal of Mammalogy, pp. 481-493.

Pante, E., Abdelkrim, J., Viricel, A., Gey, D., France, S., Boisselier, M.-C.,
Samadi, S., 2015, Use of RAD sequencing for delimiting species, Heredity, pp. 450–459.

Pante, E., France, S., Gey, D., Cruaud, C., Samadi, S., 2015, An inter-ocean
comparison of coral endemism on seamounts : the case of Chrysogorgia, Journal of Biogeography, pp. 1907–1918.

Pante E, Pascal PY, Becquet V, Viricel A, Simon-Bouhet B, Garcia P (2015) https://hal.archives-ouvertes.fr/hal-01064464

Sabatier E, Pante E, Dussud C, Van Canneyt O, Simon-Bouhet B, Viricel A (2015) Genetic monitoring of pilot whales, Globicephala spp. (Cetacea : Delphinidae), stranded on French coasts. Mammalia 79(1) : 111-114

Yang, A., Zhang, X., Agogué, H., Dupuy, C., Gong, J., 2015, Contrasting spatiotemporal patterns and environmental drivers of diversity and community structure of ammonia oxidizers, denitrifiers, and anammox bacteria in sediments of estuarine tidal flats, Annals of Microbiology, pp.

2014

Agogué, H., Mallet, C., Orvain, F., De Crignis, M., Mornet, F., Dupuy, C., 2014. Bacterial dynamics in a microphytobenthic biofilm : A tidal mesocosm approach. Journal of Sea Research 92, 36-45.

Mallet, C., Agogué, H., Bonnemoy, F., Guizien, K., Orvain, F., Dupuy, C., 2014. Structures of benthic prokaryotic communities and their hydrolytic enzyme activities resuspended from samples of intertidal mudflats : An experimental approach. Journal of Sea Research 92, 158-169.

Zhang, X., Agogué, H., Dupuy, C., Gong, J., 2014. Relative Abundance of Ammonia Oxidizers, Denitrifiers, and Anammox Bacteria in Sediments of Hyper-nutrified Estuarine Tidal Flats and in Relation to Environmental Conditions. CLEAN – Soil, Air, Water 42, 815-823.

Saunier A, Garcia P, Becquet V, Marsaud N, Escudié F, Pante E (2014) Mitochondrial genomes of the Baltic clam Macoma balthica (Bivalvia : Tellinidae) : setting the stage for studying mito-nuclear incompatibilities. BMC Evolutionary Biology 14:259

Viricel A, Pante E, Dabin W, Simon-Bouhet B (2014) Applicability of RAD-tag genotyping for inter-familial comparisons : empirical data from two cetaceans. Molecular Ecology Resources 14(3) : 597-605

2013

Kientz, B., Agogué, H., Lavergne, C., Marié, P., Rosenfeld, E., 2013. Isolation and distribution of iridescent Cellulophaga and other iridescent marine bacteria from the Charente-Maritime coast, French Atlantic. Systematic and Applied Microbiology 36, 244-251

Lavaud, J., Lepetit, B., 2013. An explanation for the inter-species variability of the photoprotective non-photochemical chlorophyll fluorescence quenching in diatoms. Biochimica et Biophysica Acta - Bioenergetics 1827, 294-302.

Lepetit, B., Sturm, S., Rogato, A., Gruber, A., Sachse, M., Falciatore, A., Kroth, P.G., Lavaud, J., 2013. High light acclimation in the secondary plastids containing diatom phaeodactylum tricornutum is triggered by the redox state of the plastoquinone pool. Plant Physiology 161, 853-865.

Becquet V, Lasota R, Pante E, Sokolowski A, Wolowicz M, Garcia P (2013) Effects of fine-scale environmental heterogeneity on local genetic structure in Macoma balthica from the Gulf of Gdañsk (southern Baltic Sea). Hydrobiologia 714(1) : 61-70

2012

Lucia, M., Bocher, P., Cosson, R.P., Churlaud, C., Bustamante, P., 2012. Evidence of species-specific detoxification processes for trace elements in shorebirds. Ecotoxicology 21, 2349-2362.

Lucia, M., Bocher, P., Cosson, R.P., Churlaud, C., Robin, F., Bustamante, P., 2012. Insight on trace element detoxification in the Black-tailed Godwit (Limosa limosa) through genetic, enzymatic and metallothionein analyses. Science of the Total Environment 423, 73-83.

Becquet, V., Simon-Bouhet, B., Pante, E., Hummel, H., Garcia, P (2012) Glacial refugium versus range limit : Conservation genetics of Macoma Balthica, a key species in the Bay of Biscay (France) Journal of Experimental Marine Biology and Ecology, 432-433, pp. 73-82.

Pante E∗, Rohfritsch A∗, Becquet V, Belkhir K, Bierne N, Garcia P (2012) SNP detection from De Novo transcriptome Sequencing in the Bivalve Macoma balthica : marker development for evolutionary studies. PLoS ONE 7(12) art. no. e52302. IF=3.2 doi:10.1371/journal.pone.0052302 (∗authors contributed equally to the work)

Spitz J., Trites A.W., Becquet V., Brind'Amour A., Cherel Y., Galois R. & Ridoux V. (2012) Cost of living dictates what whales, dolphins and porpoises eat : the importance of prey quality on predator foraging strategies. PLoS ONE, 7(11) : e50096.

Accueil

Thierry Guyot — 2018-05-16T09:05:46Z

Plateau technique de Biologie Moléculaire

Au sein du laboratoire LIENSs, le plateau technique Biologie Moléculaire a un rôle majeur dans la compréhension de l'impact de l'activité anthropique sur les écosystèmes littoraux. Ce plateau est utilisée par trois équipes du laboratoire LIENSs (AMARE, BIOFEEL et BCBS) qui étudient ces différentes pressions environnementales à l' échelle de la cellule, de l'organisme, des populations et des communautés.

Le plateau de Biologie Moléculaire est installé au bâtiment ILE (Institut du Littoral). Son aménagement a été réalisé grâce aux financement obtenus dans le cadre du CPER Poitou-Charentes, du FEDER et de la région Nouvelle Aquitaine.

Responsable : Mathieu Paoletti

Contacts

Thierry Guyot — 2018-05-14T10:04:34Z

Référent scientifique :

Mathieu Paoletti
O5 86 56 22 11
mathieu.paoletti*at*univ-lr.fr

étudiants en thèse

Thierry Guyot — 2012-02-27T15:49:40Z

Etudiants en thèse :

Marine Breitwieser en thèse depuis décembre 2015, Développement d'outils normalisables pour l'évaluation d'une contamination chimique chronique : un enjeu pour la veille environnementale en milieu littoral.

Lucas Torres en thèse depuis octobre 2015, Vers une approche phylogénétique de la conservation : application aux pétrels (oiseaux marins).

publications associées

Thierry Guyot — 2012-02-27T15:44:58Z

Liste des travaux ayant bénéficié de la plate forme :

Moncaleano-Nino A, Barrios-Latorre S, Poloche-Hernandez J, Becquet V, Huet V, Villamil L, Thomas-Guyon H, Ahrens M, Luna-Acosta A (2017) Alterations of tissue metallothionein and vitellogenin concentrations in tropical cup oysters (Saccostrea sp.) following short-term (96h) exposure to cadmium. Aquatic Toxicology (in press) .

Pante E, Poitrimol C, Saunier A, Becquet V, Garcia P (2017) Putative sex-linked heteroplasmy in the tellinid bivalve Limecola balthica (Linnaeus, 1758). Journal of Molluscan Studies 83 (1) . doi :/10.1093/mollus/eyw038

Breitwieser M*,Viricel A*, Graber M, Murillo L, Becquet V, Churlaud C, Fruitier-Arnaudin I, Huet V, Lacroix C, Pante E, Le Floch S, Thomas-Guyon H (2016) Short-term and long-term biological effects of chronic chemical contamination on natural populations of a marine bivalve. PLoS ONE 11(3):e0150184. doi : 10.1371/journal.pone.0150184 (* equal contribution).

Ben Henda Y., Laamari M., Lanneluc I., Travers M.-A., Agogué H., Arnaudin I., Bridiau N., Maugard T., Piot J.-M., Sannier F., Bordenave-Juchereau S. (2015). Di and tripeptides from marine sources can target adipogenic process and contribute to decrease adipocyte number and functions. Journal of Functional Foods 17, 1-10.

Dessier, A., Dupuy, C., Trancart, T., Audras, A., Bustamante, P., Gérard, C., 2015. Low diversity of helminth parasites in Sardina pilchardus and Engraulis encrasicolus (Clupeidae) from the Bay of Biscay. Marine and Freshwater Research 67, 1583-1588.

Pante E, Pascal PY, Becquet V, Viricel A, Simon-Bouhet B, Garcia P (2015) Evaluating the genetic effects of the invasive Ocenebra inornata on the native oyster drill Ocenebra erinacea. Marine Ecology 36(4):1188-1128.

Agogué H., Mallet C., Orvain F., De Crignis M., Mornet F., Dupuy C., 2014. Bacterial dynamics in a microphytobenthic biofilm : A tidal mesocosm approach. Journal of Sea Research 92, 36-45.

Lucia M., Bocher P., Chambosse M., Delaporte P., Bustamante P., 2014. Trace element accumulation in relation to trophic niches of shorebirds using intertidal mudflats. Journal of Sea Research 92, 134-143.

Montanié H., Ory P., Orvain F., Delmas D., Dupuy C., Hartmann H.J. 2014. Microbial interactions in marine water amended by eroded benthic biofilm : A case study from an intertidal mudflat. Journal of Sea Research 92, 74-85.

Sabatier E, Pante E, Dusud C, Van Canneyt O, Simon-Bouhet B, Viricel A (2014) Genetic monitoring of pilot whales, Globicephala spp. (Cetacea : Delphinidae), stranded on French coasts. Mammalia. doi : 10.1515/mammalia-2013-0155

Viricel A, Pante E, Dabin W, Simon-Bouhet B (2014) Applicability of RAD-tag genotyping for inter-familial comparisons : empirical data from two cetaceans. Molecular Ecology Resources 14(3) : 597-605. doi : 10.1111/1755-0998.12206

Becquet V, Lasota R, Pante E, Sokolowski A, Garcia P (2013) Effects of fine-scale environmental heterogeneity on local genetic structure in Macoma balthica (L.) from the Gulf of Gdansk (southern Baltic Sea). Hydrobiologia 714(1) : 61-70. doi : 10.1007/s10750-013-1530-9

Kientz B., Agogué H., Lavergne C., Marié P., Rosenfeld E., 2013. Isolation and distribution of iridescent Cellulophaga and other iridescent marine bacteria from the Charente-Maritime coast, French Atlantic. Systematic and Applied Microbiology 36, 244-251.

Lavaud J., Lepetit B., 2013. An explanation for the inter-species variability of the photoprotective non-photochemical chlorophyll fluorescence quenching in diatoms. Biochimica et Biophysica Acta - Bioenergetics 1827, 294-302.

Becquet V, Simon-Bouhet B, Pante E, Hummel H, Garcia P (2012) Glacial refugium versus range limit : conservation genetics of Macoma balthica, a key species in the Bay of Biscay (France). Journal of Experimental Marine Biology and Ecology 432-433 : 73-82

Lucia M, Bocher P, Cosson RP, Churlaud C, Robin F, Bustamante P (2012) Insight on trace element detoxification in the Black-tailed Godwit (Limosa limosa) through genetic, enzymatic and metallothionein analyses. Accepted for publication in Science of the Total Environment.

Pante E∗, Rohfritsch A∗, Becquet V, Belkhir K, Bierne N, Garcia P (2012) SNP detection from De Novo transcriptome Sequencing in the Bivalve Macoma balthica : marker development for evolutionary studies. PLoS ONE 7(12) art. no. e52302. doi:10.1371/journal.pone.0052302 (∗authors contributed equally to the project)

Viricel A and Rosel PE (2012) Evaluating the utility of cox1 for cetacean species identication. Marine Mammal Science 28(1) : 37-62 DOI 10.1111/j.1748-7692.2010.00460.x

Kiszka J, Simon-Bouhet B, Gastebois C, Pusineri C, Becquet V, Ridoux V (2012) Fine scale population structure and intra-species segregation of Indo-Pacific bottlenose dolphins (Tursiops aduncus) in a tropical lagoon. Accepted for publication in Journal of Experimental Marine Biology and Ecology

Ory P, Hartmann HJ, Jude F, Dupuy C, Del Amo Y, Catala P, Mornet F, Huet V, Jan B, Vincent D, Sautour B, Montanié H (2010) Pelagic food web patterns : Do they modulate virus and nanoflagellate effects on picoplankton during the phytoplankton spring bloom ? Environmental Microbiology. 12 : 2755-2772

Pascal PY, Dupuy C, Richard P, Mallet C, Armynot du Chatelet E, Niquil N (2009) Seasonal variation in consumption of benthic bacteria by meio- and macrofauna in an intertidal mudflat. Limnology and Oceanography 54 : 1048-1059

Becquet V, Lanneluc I, Simon-Bouhet B, Garcia P (2009) Microsatellite markers for the Baltic clam, Macoma balthica (Linné, 1758), a key species concerned by changing southern limit, in exploited littoral ecosystems. Conservation Genetics Resources 1(1) : 265-267

Sokolowski A, Pawlikowski K, Wolowicz M, Namiesnik J, Garcia-Meunier P (2008) Shell deformations in the Baltic clam Macoma balthica from southern Baltic Sea (the Gulf of Gdansk) ; Hypotheses of environmental impact and genetic control. Ambio 37 : 93-100

Viricel A, Strand AE, Rosel PE, Ridoux V, Garcia P (2008) Insights on common dolphin (Delphinus delphis) social organization from genetic analysis of a mass-stranded pod. Behavioral Ecology and Sociobiology, 63(2) : 173-185

2nd meeting du GDR MarCo, Roscoff, France (2012) Pante E, Rohfritch A, Becquet V, Bierne N, Garcia P. SNP detection from de novo transcriptome sequencing in the bivalve Macoma balthica : marker development for evolutionary studies (oral)

F. Tambadou, T. Caradec, S. Didelot, C. Barthélémy, V. Thiéry and R. Chevrot. Study of new Nonribosomal peptide synthetases producing antibiotics of interest. 13e colloque français des jeunes chercheurs « Vaincre la Mucoviscidose » (Paris, France, Avril 212)- Oral

F. Tambadou, T. Caradec, S. Didelot, C. Barthélémy, V. Thiéry and R. Chevrot. Study of new Nonribosomal peptide synthetases producing antibiotics of interest. 6th European CF Young Investigator Meeting (Paris, France, Avril 2012) - Oral

F. Tambadou, T. Caradec, S. Didelot, C. Barthélémy, V. Thiéry and R. Chevrot. Study of new Nonribosomal peptide synthetases producing antibiotics of interest. Third international symposium on antimicrobial peptides (Lille, France, Juin 2012)

Simon-Bouhet B, Ceyrac L, Berggren P, Dulau V, Amiri OA, Jiddawi NS, Kiszka J. Local and regional genetic structure of spinner dolphins off islands in the southwest Indian Ocean. 26th Conference of the European Cetacean Socities (Galway, Ireland, March 2012)

Agogué H, Mallet C, Bonnemoy F, Guizien K, Orvain F, Dupuy C. Resuspension of sediment prokaryotic communities during physical erosion process : an experimental approach par, LOICZ Open Science Conference “Coastal Systems, Global Change and Sustainability” (Yantai, Chine, Juin 2011) – Oral

Do Nascimento J, Garcia P, Coz R, Guyot T, Radenac G, Simon-Bouhet B. Phylogeography and conservation of a long-range disperser : the example of Necora pubes. 3rd Congress of Trends in Biodiversity and Evolution (Vairão, Portugal 5-6 December 2011) - Oral

Kiszka J, Simon-Bouhet B, Gastebois C, Martinez L, Pusineri C, Ridoux V (2010) Fine-scale population structure of insular Indo-Pacific bottlenose dolphins (Tursiops aduncus) over temporal scales. 24th Conference of the European Cetacean Socities (Stralsund, Germany, March 2010)

Simon-Bouhet B, Kiszka J, Becquet V, Gastebois C, Martinez L, Pusineri C, Ridoux V (2010) Social structure in Indo-Pacific Bottlenose Dolpins (Tursiops aduncus) assessed by association patterns and kinship analyses. 24th Conference of the European Cetacean Socities (Stralsund, Germany, March 2010)

Spitz J, Trites A.W, Becquet V, Brind'Amour A, Cherel Y, Galois R, Ridoux V. Metabolic cost of living dictates what whales, dolphins and porpoises must eat. 19th Biennial Conference on the Biology of Marine Mammals (Tampa, USA, 26 November-3 December 2009) - Oral

Agogué H, De Crignis M, Mallet C, Orvain F, Mornay F, Dupuy C (2011) Bacterial dynamics in a microphytobenthic biofilm : a tidal mesocosm approach. 4th Congress of European Microbiologists, FEMS (Genève, Suisse, Septembre 2011) (poster)

International Meeting of the Society for Molecular Biology and Evolution, Dublin, Ireland (2012) Pante E, Rohfritch A, Becquet V, Bierne N, Garcia P. Extreme SNP density on the genome of Macoma balthica, a model system for the study of marine hybrid zone dynamics (poster)

International Meeting of the Society for Molecular Biology and Evolution, Dublin, Ireland (2012) Becquet V, Rohfritch A, Pante E, Garcia P. De novo analysis of the transcriptome of the marine bivalve Macoma balthica with the 454 sequencing technology. (poster)

Caradec T, Tambadou F, Sopéna V, Didelot S, Barthélémy C, Chevrot R. Etude des systèmes génétiques NRPS de production de nouveaux antibiotiques_anti-Pseudomonas aeruginosa & Staphylococcus aureus. 12 ème colloque français des jeunes chercheurs Vaincre la Mucoviscidose (Paris, France, 3-4 March 2011)

Lepetit B and Sturm S. Expression of lhcx genes under various light conditions in the diatom Phaeodactylum tricornutum, 1st International Conference "The Molecular Life of Diatoms" (Atlanta, Etats-Unis, 5-9 June 2011) (poster)

Mallet C, Agogué H, Bonnemoy F, De Crignis M, Guizien K, Orvain F, Dupuy C. Remise en suspension des communautés procaryotes du sédiment au cours d'un événement d'érosion : approche expérimentale en érodimetrie., VIIIème Congrès de la SFM (Société Française de Microbiologie), Marseille, France, Juin 2010 (poster)

Kientz B, Agogué H, Rosenfeld E. Characterization of culturable bacterial populations associated to sediment and marine organisms., ESF (European Science Foundation) Research conference : Marine Biotechnology : Future Challenges, Acquafredda di Maratea, Italie, Juin 2010 (poster)

Mirimin L, Viricel A, Amaral AR, Murphy S, Northridge S, Ridoux V and Rogan E (2009) Population genetic structure of common dolphins in the North-east Atlantic using microsatellite loci and mtDNA control region markers. Report to the International Whaling Commission SC/61/SM 27 12 pp.

Murphy S, Natoli A, Amaral AR, Mirimin L, Viricel A, Caurant F, Hoelzel R, Evans P (2009) Short-beaked common dolphin Delphinus delphis. pp. 111-130 In Report of ASCOBANS/HELCOM small cetacean population structure workshop. (Ed. P.G.H. Evans and J. Teilmann) ASCOBANS, Bonn, Germany. 141 pp.