Production scientifique de l’équipe BIOFEEL


Liste des publications 2023 des chercheurs de l’équipe BIOFEEL référencées sous HAL :

37 résultats

2023

Article dans une revue

Multi-sensor data loggers identify the location and timing in four poaching cases of the endangered Eurasian Curlew Numenius arquata
Frédéric Jiguet , Pierrick Bocher , Aude Bourgeois , Adrien Chaigne , Alain Chartier , Heinz Düttmann , Camille Duvivier , Thomas Fartmann , Charlotte Francesiaz , Emmanuel Joyeux , Steffen Kämpfer , Griet Nijs , Pierre Rousseau , Jessica Schmidt , Geert Spanoghe , Heike Weber , Helmut Kruckenberg
Forensic Science International: Animals and Environments, 2023, 4, pp.100069. ⟨10.1016/j.fsiae.2023.100069⟩
Evaluation of cataract formation in fish exposed to environmental radiation at Chernobyl and Fukushima
Adélaïde Lerebours , Justyn Regini , Roy A Quinlan , Toshihiro Wada , Barbara Pierscionek , Martin Devonshire , Alexia A Kalligeraki , Alice Uwineza , Laura Young , John M Girkin , Phil Warwick , Kurt Smith , Masato Hoshino , Kentaro Uesugi , Naoto Yagi , Nick Terrill , Olga Shebanova , Tim Snow , Jim T Smith
Science of the Total Environment, 2023, 902, pp.165957. ⟨10.1016/j.scitotenv.2023.165957⟩
Circumpolar assessment of mercury contamination: the Adélie penguin as a bioindicator of Antarctic marine ecosystems
Fanny Cusset , Paco Bustamante , Alice Carravieri , Clément Bertin , Rebecka Brasso , Ilaria Corsi , Michael Dunn , Louise Emmerson , Gaël Guillou , Tom Hart , Mariana Juáres , Akiko Kato , Ana Laura Machado-Gaye , Candice Michelot , Silvia Olmastroni , Michael Polito , Thierry Raclot , Mercedes Santos , Annie Schmidt , Colin Southwell , Alvaro Soutullo , Akinori Takahashi , Jean-Baptiste Thiebot , Phil Trathan , Pierre Vivion , Claire Waluda , Jérôme Fort , Yves Cherel
Ecotoxicology, 2023, 32 (8), pp.1024-1049. ⟨10.1007/s10646-023-02709-9⟩
The ZooScan and the ZooCAM zooplankton imaging systems are intercomparable: A benchmark on the Bay of Biscay zooplankton
Nina Grandremy , Christine Dupuy , Pierre Petitgas , Sophie Le Mestre , Paul Bourriau , Antoine Nowaczyk , Bertrand Forest , Jean-Baptiste Romagnan
Limnology and Oceanography: Methods, 2023, 21 (11), pp.718-733. ⟨10.1002/lom3.10577⟩
Isotopic and biochemical trophic markers reveal the complexity of interactions at the base of pelagic food webs (Mediterranean sea).
Chia-Ting Chen , François Carlotti , Mireille Harmelin-Vivien , Yves Letourneur , Nicolas Savoye , Gaël Guillou , Benoit Lebreton , Javier Tesán-Onrubia , Aude Barani , Véronique Cornet , Loïc Guilloux , Anaïs Esposito , Christian Ré , Daniela Bănaru
Marine Environmental Research, 2023, 190, pp.106123. ⟨10.1016/j.marenvres.2023.106123⟩
Tracking wintering areas and post-breeding migration of a declining farmland bird – An indispensable basis for successful conservation
Steffen Kämpfer , Helmut Kruckenberg , Heinz Düttmann , Andrea Kölzsch , Frédéric Jiguet , Pierrick Bocher , Thomas Fartmann
Global Ecology and Conservation, 2023, 45, pp.e02527. ⟨10.1016/j.gecco.2023.e02527⟩
Small Space but High Diversity: Spatial and Temporal Habitat Use by Endangered Eurasian Curlew at Wintering Sites Throughout Europe
Marie Donnez , Philipp Schwemmer , Jérôme Fort , Stefan Garthe , Martin Boschert , Heinz Düttmann , Jaanus Elts , Thomas Fartmann , Wolfgang Fiedler , Samantha Franks , Frédéric Jiguet , Steffen Kämpfer , Michał Korniluk , Helmut Kruckenberg , Dominik Krupiński , Riho Marja , Moritz Mercker , Przemysław Obłoza , Henk Jan Ottens , Markus Piha , Frédéric Robin , Pierre Rousseau , Verena Rupprecht , Pierrick Bocher
Wetlands, 2023, 43 (7), pp.80. ⟨10.1007/s13157-023-01728-w⟩
Diversity, community structure, and quantity of eukaryotic phytoplankton revealed using 18S rRNA and plastid 16S rRNA genes and pigment markers: A case study of the Pearl River Estuary
Shumin Xu , Guihao Li , Cui He , Yi Huang , Dan Yu , Huiwen Deng , Zhuyin Tong , Yichong Wang , Christine Dupuy , Bangqin Huang , Zhuo Shen , Jie Xu , Jun Gong
Marine Life Science & Technology, 2023, 5 (3), pp.415-430. ⟨10.1007/s42995-023-00186-x⟩
Metabolomics-Based Investigation on the Metabolic Changes in Crassostrea gigas Experimentally Exposed to Galvanic Anodes
Nathalie Imbert-Auvray , Denis Fichet , Pierre-Edouard Bodet , Pascaline Ory , René Sabot , Philippe Refait , Marianne Graber
Metabolites, 2023, 13 (7), pp.869. ⟨10.3390/metabo13070869⟩
Seasonal variations of low pesticides contamination and biomarker responses in marine bivalves from French estuaries
Adélaïde Lerebours , Thierno Diallo , Annie Lecureuil , Justine Receveur , Valérie Huet , Julien Parinet , Thierry Guérin , Stéphane Le Floch , Hélène Thomas
Marine Pollution Bulletin, 2023, 192, pp.114988. ⟨10.1016/j.marpolbul.2023.114988⟩
Metazoan zooplankton in the Bay of Biscay: 16 years of individual sizes and abundances from the ZooScan and ZooCAM imaging systems
Nina Grandremy , Paul Bourriau , Edwin Daché , Marie-Madeleine Danielou , Mathieu Doray , Christine Dupuy , Bertrand Forest , Laetitia Jalabert , Martin Huret , Sophie Le Mestre , Antoine Nowaczyk , Pierre Petitgas , Philippe Pineau , Justin Rouxel , Morgan Tardivel , Jean-Baptiste Romagnan
Earth System Science Data, 2023, ⟨10.5194/essd-2023-187⟩
Assessing potential conflicts between offshore wind farms and migration patterns of a threatened shorebird species
Philipp Schwemmer , R. Pederson , K. Haecker , P. Bocher , Jérôme Fort , M. Mercker , F. Jiguet , J. Elts , R. Marja , M. Piha , P. Rousseau , S. Garthe
Animal Conservation, 2023, ⟨10.1111/acv.12817⟩
Data quality control considerations in multivariate environmental monitoring: experience of the French coastal network SOMLIT
Elsa Breton , Nicolas Savoye , Peggy Rimmelin-Maury , Benoit Sautour , Eric Goberville , Arnaud Lheureux , Thierry Cariou , Sophie Ferreira , Hélène Agogué , Samir Alliouane , Fabien Aubert , Sébastien Aubin , Eric Berthebaud , Hadrien Blayac , Lucie Blondel , Cédric Boulart , Yann Bozec , Sarah Bureau , Arnaud Caillo , Arnaud Cauvin , Jean-Baptiste Cazes , Léo Chasselin , Pascal Claquin , Pascal Conan , Marie-Ange Cordier , Laurence Costes , Romain Crec’hriou , Olivier Crispi , Muriel Crouvoisier , Valérie David , Yolanda del Amo , Hortense de Lary , Gaspard Delebecq , Jeremy Devesa , Aurélien Domeau , Maria Durozier , Claire Emery , Eric Feunteun , Juliette Fauchot , Valérie Gentilhomme , Sandrine Geslin , Mélanie Giraud , Karine Grangeré , Gerald Grégori , Emilie Grossteffan , Aurore Gueux , Julien Guillaudeau , Gael Guillou , Manon Harrewyn , Orianne Jolly , Florence Jude-Lemeilleur , Paul Labatut , Nathalie Labourdette , Nicolas Lachaussée , Michel Lafont , Veronique Lagadec , Christophe Lambert , Jezebel Lamoureux , Laurent Lanceleur , Benoit Lebreton , Eric Lecuyer , David Lemeille , Yann Leredde , Cédric Leroux , Aude Leynaert , Stéphane L'Helguen , Camilla Liénart , Eric Macé , Eric Maria , Barbara Marie , Dominique Marie , Sébastien Mas , Line Mornet , Behzad Mostajir , Laure Mousseau , Antoine Nowaczyk , Sandra Nunige , René Parra , Thomas Paulin , David Pecqueur , Franck Petit , Philippe Pineau , Patrick Raimbault , Fabienne Rigaut-Jalabert , Christophe Salmeron , Ian Salter , Pierre-Guy Sauriau , Laurent Seuront , Emmanuelle Sultan , Rémi Valdès , Vincent Vantrepotte , Francesca Vidussi , Florian Voron , Renaud Vuillemin , Laurent Zudaire , Nicole Garcia
Frontiers in Marine Science, 2023, 10, pp.12. ⟨10.3389/fmars.2023.1135446⟩
Les usagers d’une plage péri-urbaine face à la contamination microbiologique des eaux de baignade
Maëlig Le Béguec , Emmanuelle Petit , Luc Vacher , Hélène Agogué , Mery Ndione
VertigO : La Revue Électronique en Sciences de l'Environnement, 2023, Volume 23 (numéro 1), ⟨10.4000/vertigo.40071⟩
Survival of Atlantic salmon and sea trout smolts in transitional waters
Celine Artero , Stephen Gregory , William A. Beaumont , Quentin Josset , Nicolas Jeannot , Alan Cole , Ludivine Lamireau , Elodie Réveillac , Rasmus B. Lauridsen
Marine Ecology Progress Series, 2023, 709, pp.91-108. ⟨10.3354/meps14278⟩
Spatial variations of biochemical content and stable isotope ratios of size-fractionated plankton in the Mediterranean Sea (MERITE-HIPPOCAMPE campaign)
Javier Angel Tesán-Onrubia , Marc Tedetti , François Carlotti , Melissa Tenaille , Loic Guilloux , Marc Pagano , Benoit Lebreton , Gaël Guillou , Pamela Fierro-González , Catherine Guigue , Sandrine Chifflet , Théo Garcia , Ismail Boudriga , Malika Belhassen , Amel Bellaaj Zouari , Daniela Bănaru , Marc Tedetti
Marine Pollution Bulletin, 2023, 189, pp.114787. ⟨10.1016/j.marpolbul.2023.114787⟩
HgCl2 addition to pore water samples from cold seeps can affect the geochemistry of dissolved inorganic carbon ([DIC], δ13CDIC)
Claudio Argentino , Dimitri Kalenitchenko , Matteus Lindgren , Giuliana Panieri
Marine Chemistry, 2023, 251, pp.104236. ⟨10.1016/j.marchem.2023.104236⟩
Isotopic niches of the Northern shoveler Spatula clypeata in spring migratory stopover sites in the Marais breton, France
Axelle Moreau , Pierrick Bocher , Pascal Bonnin , Sébastien Farau , Christine Dupuy
Isotopes in Environmental and Health Studies, 2023, pp.1-13. ⟨10.1080/10256016.2023.2208865⟩
Hot Vents Beneath an Icy Ocean: The Aurora Vent Field, Gakkel Ridge, Revealed
Eva Ramirez-Llodra , Claudio Argentino , Maria Baker , Antje Boetius , Carolina Costa , Håkon Dahle , Emily Denny , Pierre-Antoine Dessandier , Mari Eilertsen , Benedicte Ferre , Christopher German , Kevin Hand , Ana Hilário , Lawrence Hislop , John Jamieson , Dimitri Kalenitchenko , Achim Mall , Giuliana Panieri , Autun Purser , Sofia Ramalho , Eoghan Reeves , Leighton Rolley , Samuel Pereira , Pedro Ribeiro , Muhammed Fatih Sert , Ida Steen , Marie Stetzler , Runar Stokke , Lissette Victorero , Francesca Vulcano , Stig Vågenes , Kate Waghorn , Stefan Buenz
Oceanography, 2023, 36 (1), ⟨10.5670/oceanog.2023.103⟩
An overview of marine non-indigenous species found in three contrasting biogeographic metropolitan French regions: Insights on distribution, origins and pathways of introduction
Cécile Massé , Frédérique Viard , Suzie Humbert , Elvire Antajan , Isabelle Auby , Guy Bachelet , Guillaume Bernard , Vincent Bouchet , Thomas Burel , Alice Delegrange , Sandrine Derrien-Courtel , Gabin Droual , Laurent Guérin , Benoit Gouillieux , Philippe Goulletquer , Pierre-Guy Sauriau , Amelia Curd , Virginie Raybaud , Anne-Laure Janson , Jérôme Jourde , Céline Labrune , Delphine Thibault , Nicolas Lavesque , Sandrine Ruitton , Jean-Charles Leclerc , Michel Le Duff , Vincent Le Garrec , Dorothée Vincent , Aurore Raoux , Pierre Noël , Nicolas Spilmont , Jean-Claude Dauvin , Antoine Nowaczyk , Christine Pergent-Martini , Jean-Philippe Pezy
Diversity, 2023, 15 (2), pp.161. ⟨10.3390/d15020161⟩
Handwritten letters and photo albums linking geoscientists with school classes
Mathew A Stiller-Reeve , Claudio Argentino , Kate Alyse Waghorn , Sunil Vadakkepuliyambatta , Dimitri Kalenitchenko , Giuliana Panieri
Geoscience Communication, 2023, ⟨10.5194/gc-6-1-2023⟩
Microbial mats as model to decipher climate change effect on microbial communities through a mesocosm study
Camille Mazière , Robert Duran , Christine Dupuy , Cristiana Cravo-Laureau
Frontiers in Microbiology, 2023, 14, pp.1039658. ⟨10.3389/fmicb.2023.1039658⟩
Influence of typology and management practices on water pCO 2 and atmospheric CO2 fluxes over two temperate shelf–estuary–marsh water continuums
Jérémy Mayen , Pierre Polsenaere , Aurore Regaudie de Gioux , Christine Dupuy , Marie Vagner , Jean-Christophe Lemesle , Benoit Poitevin , Philippe Souchu
Regional Studies in Marine Science, 2023, 67, pp.103209. ⟨10.1016/j.rsma.2023.103209⟩
Behavioral responses to offshore windfarms during migration of a declining shorebird species revealed by GPS-telemetry
Philipp Schwemmer , Moritz Mercker , Karena Haecker , Helmut Kruckenberg , Steffen Kämpfer , Pierrick Bocher , Jérôme Fort , Frédéric Jiguet , Samantha Franks , Jaanus Elts , Riho Marja , Markus Piha , Pierre Rousseau , Rebecca Pederson , Heinz Düttmann , Thomas Fartmann , Stefan Garthe
Journal of Environmental Management, 2023, 342, pp.118131. ⟨10.1016/j.jenvman.2023.118131⟩
Seasonal variations of low pesticides contamination and biomarker responses in marine bivalves from French estuaries
Adélaïde Lerebours , Thierno Diallo , Annie Lecureuil , Justine Receveur , Valérie Huet , Julien Parinet , Thierry Guérin , Stéphane Le Floch , Hélène Thomas
Marine Pollution Bulletin, 2023, 192, pp.114988. ⟨10.1016/j.marpolbul.2023.114988⟩
Dependency of Arctic zooplankton on pelagic food sources: New insights from fatty acid and stable isotope analyses
Doreen Kohlbach , Benoit Lebreton , Gaёl Guillou , Anette Wold , Haakon Hop , Martin Graeve , Philipp Assmy
Limnology and Oceanography, 2023, 68 (10), pp.2346-2358. ⟨10.1002/lno.12423⟩
An Arctic natural oil seep investigated from space to the seafloor
Giuliana Panieri , Claudio Argentino , Sofia P Ramalho , Francesca Vulcano , Alessandra Savini , Luca Fallati , Trond Brekke , Giulia Galimberti , Federica Riva , João Balsa , Mari H Eilertsen , Runar Stokke , Ida H Steen , Diana Sahy , Dimitri Kalenitchenko , Stefan Büenz , Rune Mattingsdal
Science of the Total Environment, 2023, 907, pp.167788. ⟨10.1016/j.scitotenv.2023.167788⟩
Phytoplanktonic species in the haloalkaline Lake Dziani Dzaha select their archaeal microbiome
Maxime Bruto , Philippe Oger , Patrice Got , Cécile Bernard , Delphine Melayah , Lilian Cloarec , Charlotte Duval , Arthur Escalas , Sébastien Duperron , Ludivine Guigard , Christophe Leboulanger , Magali Ader , Gerard Sarazin , Didier Jézéquel , Hélène Agogué , Marc Troussellier , Mylène Hugoni
Molecular Ecology, 2023, 32 (24), pp.6824-6838. ⟨10.1111/mec.17179⟩
Modelling the distribution of rare and data-poor diadromous fish at sea for protected area management
Sophie A M Elliott , Anthony Acou , Laurent Beaulaton , Jérôme Guitton , Elodie Réveillac , Etienne Rivot
Progress in Oceanography, 2023, 210, pp.102924. ⟨10.1016/j.pocean.2022.102924⟩
Distribution and trophic functioning of planktonic communities in coastal marshes in Atlantic Coast of France
Lauriane Bergeon , Frédéric Azémar , Claire Carré , Bénédicte Dubillot , Claire Emery , Hélène Agogué , Philippe Pineau , Thomas Lacoue-Labarthe , Marc Bouvy , Michèle Tackx , Christine Dupuy
Estuarine, Coastal and Shelf Science, 2023, pp.108430. ⟨10.1016/j.ecss.2023.108430⟩
Multi-Year Monitoring of the Toxicological Risk of Heavy Metals Related to Fish Consumption by the Population of the Kendari Region (Southeast Sulawesi, Indonesia)
Mimie Saputri , Yusnaini Yusnaini , La Sara , Ita Widowati , Thierry Guyot , Denis Fichet , Gilles Radenac
Toxics, 2023, 11 (7), pp.592. ⟨10.3390/toxics11070592⟩
Wide-scope screening of multi-class contaminants in seafood using a novel sample preparation (QuEChUP) procedure coupled with UHPLC-Q-TOF-MS: application for semi-quantitation of real seafood samples
Thierno Diallo , Yassine Makni , Adélaïde Lerebours , Hélène Thomas , Thierry Guérin , Julien Parinet
Food Chemistry, 2023, 426, pp.136572. ⟨10.1016/j.foodchem.2023.136572⟩
Seasonality and growth in tropical freshwater ectotherm vertebrates: Results from 1‐year experimentation in the African gray bichir, giraffe catfish, and the West African mud turtle
Axelle Gardin , Olga Otero , Elodie Réveillac , Alexandra Lafitte , Xavier Valentin , Florian Lapalus , Didier Bouchon , Géraldine Garcia
Ecology and Evolution, 2023, 13 (3), pp.e9936. ⟨10.1002/ece3.9936⟩
Fisheries-dependent and -Independent data used to model the distribution of diadromous fish at-sea
Sophie A.M. Elliott , Noémie Deleys , Laurent Beaulaton , Etienne Rivot , Elodie Réveillac , Anthony Acou
Data in Brief, 2023, 48, pp.109107. ⟨10.1016/j.dib.2023.109107⟩
Hydrology and small pelagic fish drive the spatio–temporal dynamics of springtime zooplankton assemblages over the Bay of Biscay continental shelf
Nina Grandremy , Jean-Baptiste Romagnan , Christine Dupuy , Mathieu Doray , Martin Huret , Pierre Petitgas
Progress in Oceanography, 2023, 210, pp.102949. ⟨10.1016/j.pocean.2022.102949⟩
SOMLIT-Antioche time series (French Research Infrastructure ILICO): long-term core parameter monitoring in the Pertuis Charentais area on the French Atlantic coast
Philippe Pineau , Hélène Agogué , Fabien Aubert , Martine Bréret , Brizard Yves , Claire Emery , Gaël Guillou , Nicolas Lachaussée , Benoit Lebreton , Pierre-Guy Sauriau
SEANOE, 2023, ⟨10.17882/96831⟩
Approaches to determine pesticides in marine bivalves
Thierno Diallo , Julia Leleu , Julien Parinet , Thierry Guérin , Hélène Thomas , Adélaïde Lerebours
Analytical and Bioanalytical Chemistry, 2023, 415 (16), pp.3093-3110. ⟨10.1007/s00216-023-04709-4⟩

Liste des publications 2022 des chercheurs de l’équipe BIOFEEL référencées sous HAL :

25 résultats

2022

Article dans une revue

The significance of cephalopod beaks as a research tool: An update
José Xavier , Alexey Golikov , José Queirós , Catalina Perales-Raya , Rigoberto Rosas-Luis , José Abreu , Giambattista Bello , Paco Bustamante , Juan Capaz , Valerie Dimkovikj , Angel González , Hugo Guímaro , Airam Guerra-Marrero , José Gomes-Pereira , Tsunemi Kubodera , Vladimir Laptikhovsky , Evgenia Lefkaditou , Fedor Lishchenko , Amanda Luna , Bilin Liu , Graham Pierce , Vasco Pissarra , Elodie Reveillac , Evgeny Romanov , Rui Rosa , Marjorie Roscian , Lisa Rose-Mann , Isabelle Rouget , Pilar Sánchez , Antoni Sánchez-Márquez , Sónia Seixas , Louise Souquet , Jaquelino Varela , Erica Vidal , Yves Cherel
Frontiers in Physiology, 2022, 13, ⟨10.3389/fphys.2022.1038064⟩
Are mussels and oysters capable of reducing the abundances of Picochlorum sp., responsible for a massive green algae bloom in Thau lagoon, France?
Marion Richard , Béatrice Bec , Lauriane Bergeon , Matthew Hébert , Cécile Mablouké , Franck Lagarde
Journal of Experimental Marine Biology and Ecology, 2022, 556, pp.151797. ⟨10.1016/j.jembe.2022.151797⟩
A Machine-Learning Approach to Intertidal Mudflat Mapping Combining Multispectral Reflectance and Geomorphology from UAV-Based Monitoring
Guillaume Brunier , Simon Oiry , Nicolas Lachaussée , Laurent Barillé , Vincent Le Fouest , Vona Méléder
Remote Sensing, 2022, 14 (22), pp.5857. ⟨10.3390/rs14225857⟩
Bird migration in space and time: chain migration by Eurasian curlew Numenius arquata arquata along the East Atlantic Flyway
Rebecca Pederson , Pierrick Bocher , Stefan Garthe , Jérôme Fort , Moritz Mercker , Verena Auernhammer , Martin Boschert , Philippe Delaporte , Jaanus Elts , Wolfgang Fiedler , Michał Korniluk , Dominik Krupiński , Riho Marja , Pierre Rousseau , Lukas Thiess , Philipp Schwemmer
Journal of Avian Biology, 2022, 91 (9), pp.1813-1825. ⟨10.1111/jav.02924⟩
Diet and trophic interactions of Mediterranean planktivorous fishes
Chia-Ting Chen , François Carlotti , Mireille Harmelin-Vivien , Benoit Lebreton , Gaël Guillou , Laura Vassallo , Marjorie Le Bihan , Daniela Bănaru
Marine Biology, 2022, 169 (9), pp.119. ⟨10.1007/s00227-022-04103-1⟩
Archaea Carotenoids: Natural Pigments with Unexplored Innovative Potential
Antoine Grivard , Isabelle Goubet , Luiz Miranda de Souza Duarte Filho , Valérie Thiéry , Sylvie Chevalier , Raimundo Gonçalves de Oliveira Júnior , Noureddine El Aouad , Jackson Roberto Guedes da Silva Almeida , Przemysław Sitarek , Lucindo José Quintans-Junior , Raphaël Grougnet , Hélène Agogué , Laurent Picot
Marine drugs, 2022, Marine Pigments, 20 (8), pp.524. ⟨10.3390/md20080524⟩
Combination of marine and artificial freshwater habitats provides wintering Black-tailed Godwits with landscape supplementation
Clément Jourdan , Jérôme Fort , Frédéric Robin , David Pinaud , Philippe Delaporte , Didier Desmots , Alain Gentric , Pamela Lagrange , Julien Gernigon , Loïc Jomat , Pierre Rousseau , Pierrick Bocher
Wader Study, 2022, 129 (2), ⟨10.18194/ws.00271⟩
Ecological Observations Based on Functional Gene Sequencing Are Sensitive to the Amplicon Processing Method
Fabien Cholet , Agata Lisik , Hélène Agogué , Umer Z. Ijaz , Philippe Pineau , Nicolas Lachaussée , Cindy J. Smith
Spatio-temporal contamination of microplastics in shellfish farming regions: A case study
Adélaïde Lerebours , Marguerite Bathie , Maria Kazour , Rachid Amara , Valérie Huet , Hélène Thomas
Marine Pollution Bulletin, 2022, 181, pp.113842. ⟨10.1016/j.marpolbul.2022.113842⟩
Drivers for primary producers’ dynamics: New insights on annual benthos pelagos monitoring in anthropised freshwater marshes (Charente-Maritime, France)
Raphaël Moncelon , Edouard Metzger , Philippe Pineau , Claire Emery , Eric Bénéteau , Charlotte de Lignières , Olivier Philippine , François-Xavier Robin , Christine Dupuy
Water Research, 2022, 221, pp.118718. ⟨10.1016/j.watres.2022.118718⟩
Northern range expansion of the Asian mussel Arcuatula senhousia (Benson, 1842) along the French Atlantic coasts
Cécile Massé , Jerôme Jourde , Denis Fichet , Pierre-Guy Sauriau , Manon Dartois , François Ghillebaert , Chloé Dancie
BioInvasions Records, 2022, 11 (3), pp.700-709. ⟨10.3391/bir.2022.11.3.12⟩
Population genetics reveals divergent lineages and ongoing hybridization in a declining migratory fish species complex
Quentin Rougemont , Charles Perrier , Anne-Laure Besnard , Isabelle Lebel , Yann Abdallah , Eric Feunteun , Elodie Réveillac , Emilien Lasne , Anthony Acou , David José Nachón , Fernando Cobo , Guillaume Evanno , Jean-Luc Baglinière , Sophie Launey
Heredity, 2022, 129, pp.137-151. ⟨10.1038/s41437-022-00547-9⟩
Influence of habitat quality and diversity on two populations of Eurasian curlew (Numenius arquata) with contrasting dynamics in Western France
Raphaël Leprince , Etienne Debenest , Christophe Lartigau , Victor Turpaud-Fizzala , Cyrille Poirel , Nicolas Lachaussée , Marie Donnez , Pierrick Bocher
Ornis Fennica, 2022, pp.00-00. ⟨10.51812/of.124713⟩
Merging Satellite and in situ Data to Assess the Flux of Terrestrial Dissolved Organic Carbon From the Mackenzie River to the Coastal Beaufort Sea
Clément Bertin , Atsushi Matsuoka , Antoine Mangin , Marcel Babin , Vincent Le Fouest
Frontiers in Earth Science, 2022, 10, ⟨10.3389/feart.2022.694062⟩
Daytime, tidal amplitude and protected areas influence movements and habitat use on mudflats of wintering black-tailed godwits
Clément Jourdan , Jérôme Fort , David Pinaud , Philippe Delaporte , Thomas Hérault , Marko Jankovic , Loïc Jomat , Nicolas Lachaussée , Philippe Pineau , Frédéric Robin , Pierre Rousseau , Pierrick Bocher
Estuarine, Coastal and Shelf Science, 2022, 268, pp.107782. ⟨10.1016/j.ecss.2022.107782⟩
Diet of the soft-plumaged petrel (Pterodroma mollis) at Kerguelen Islands and a review of the food of gadfly petrels (Pterodroma spp.) worldwide
Yves Cherel , Pierrick Bocher
Marine Biology, 2022, 169 (2), pp.31. ⟨10.1007/s00227-022-04019-w⟩
Do microbial planktonic communities reflect the ecological changes of Glorieuses coral reefs (Iles Eparses, Western Indian Ocean)?
Marc Bouvy , Alice Belieres , Claire Carré , Patrice Got , Marc Pagano , Hélène Agogué , Beatrice Bec , Cécile Roques , Lionel Bigot , Pascale Chabanet , Christine Dupuy
Marine Pollution Bulletin, 2022, 174, pp.113218. ⟨10.1016/j.marpolbul.2021.113218⟩
Importance of Serpulid Reef to the Functioning of a Hypersaline Estuary
Terence Palmer , Natasha Breaux , Benoit Lebreton , Gaël Guillou , Jennifer Beseres Pollack
Estuaries and Coasts, 2022, ⟨10.1007/s12237-021-00989-0⟩
Temporal variations in fecal indicator bacteria in bathing water and sediment in a coastal ecosystem (Aytré Bay, Charente-Maritime, France)
Méry Ndione , Pascaline Ory , Tony Agion , Michaël Treilles , Luc Vacher , Benoit Simon-Bouhet , Maëlig Le Beguec , Philippe Pineau , Hélène Montanié , Hélène Agogué
Marine Pollution Bulletin, 2022, 175, pp.113360. ⟨10.1016/j.marpolbul.2022.113360⟩
Distribution and abundance of leptocephali in the western South Pacific region during two large-scale sampling surveys
Michael J Miller , Madoka Shimizu , Jun Aoyama , Shun Watanabe , Mari Kuroki , Eric Feunteun , Takatoshi Higuchi , Aya Takeuchi , Yu-San Han , Pierre Sasal , Christine Dupuy , Donald Jellyman , Robert Schabetsberger , Shingo Kimura , Noritaka Mochioka , Tsuguo Otake , Katsumi Tsukamoto
Progress in Oceanography, 2022, 206, pp.102853. ⟨10.1016/j.pocean.2022.102853⟩
Development and validation according to the SANTE guidelines of a QuECh-ERS-UHPLC-QTOF-MS method for the screening of 204 pesticides in bivalves
Thierno Diallo , Yassine Makni , Adélaïde Lerebours , Hélène Thomas , Thierry Guérin , Julien Parinet
Food Chemistry, 2022, 386, pp.132871. ⟨10.1016/j.foodchem.2022.132871⟩
Influence of aphotic haloclines and euxinia on organic biomarkers and microbial communities in a thalassohaline and alkaline volcanic crater lake
David Sala , Vincent Grossi , Hélène Agogué , Christophe Leboulanger , Didier Jézéquel , Gérard Sarazin , Ingrid Antheaume , Cécile Bernard , Magali Ader , Mylène Hugoni
Geobiology, 2022, 20 (2), pp.292-309. ⟨10.1111/gbi.12477⟩
Climate change influences chlorophylls and bacteriochlorophylls metabolism in hypersaline microbial mat
Camille Mazière , M. Bodo , M.A. Perdrau , Cristiana Cravo-Laureau , Robert Duran , C. Dupuy , Cédric Hubas
Science of the Total Environment, 2022, 802, pp.149787. ⟨10.1016/j.scitotenv.2021.149787⟩
Strong reorganization of multi-domain microbial networks associated with primary producers sedimentation from oxic to anoxic conditions in an hypersaline lake
Arthur Escalas , Marc Troussellier , Delphine Melayah , Maxime Bruto , Nicolas Sébastien , Cécile Bernard , Magali Ader , Christophe Leboulanger , Hélène Agogué , Mylène Hugoni
FEMS Microbiology Ecology, 2022, 97 (12), pp.fiab163. ⟨10.1093/femsec/fiab163⟩

Communication dans un congrès

Projet EVALG : Mise au point de protocoles et d'indicateurs pour l'EVaLuation de l'état écologique et des stocks de macroALGues au sein du Parc Naturel Marin de l'Estuaire de la Gironde et de la Mer des Pertuis
Sarah Bouchemousse , Anthony Le Bris , Tristan Le Goff , Jean-Marc Thirion , Julie Vollette , Pierre-Guy Sauriau , Sophie Richier , Rémy Michel , Yohan Weiller , Aurélie Dessier
Séminaire "Les habitats rocheux intertidaux et subtidaux des façades Manche-Mer du Nord-Atlantique", Anna Capietto; Sandrine Derrien; Thibaut de Bettignies; Sophie Beauvais; Anahita Marzin; Alain Pibot; Juliette Delavenne, Nov 2022, Brest, France. pp.99-102

Liste des publications 2021 des chercheurs de l’équipe BIOFEEL référencées sous HAL :

33 résultats

2021

Article dans une revue

Molecular genetic diversity of seaweeds morphologically related to Ulva rigida at three sites along the French Atlantic coast
Manon Dartois , Eric Pante , Amelia Viricel , Vanessa Becquet , Pierre-Guy Sauriau
PeerJ, 2021, 9 (e11966), pp.1-27. ⟨10.7717/peerj.11966⟩
The “Spaghetti Project”: the final identification guide to European Terebellidae (sensu lato) (Annelida, Terebelliformia)
Nicolas Lavesque , Pat Hutchings , Mario Londoño-Mesa , João M.M. Nogueira , Guillemine Daffe , Arne Nygren , Hugues Blanchet , Paulo Bonifácio , Caroline Broudin , Jean-Claude Dauvin , Gabin Droual , Benoit Gouillieux , Jacques Grall , Benjamin Guyonnet , Céline Houbin , Suzie Humbert , Anne-Laure Janson , Jérôme Jourde , Céline Labrune , Bastien Lamarque , Lise Latry , Vincent Le Garrec , Jean-Philippe Pezy , Pierre-Guy Sauriau , Xavier de Montaudouin , Corine Pelaprat
European Journal of Taxonomy, 2021, 782, pp.108-156. ⟨10.5852/ejt.2021.782.1593⟩
Multi-trophic markers illuminate the understanding of the functioning of a remote, low coral cover Marquesan coral reef food web
Pauline Fey , Valeriano Parravicini , Daniela Bănaru , Jan Dierking , René Galzin , Benoit Lebreton , Tarik Meziane , Nicholas Polunin , Mayalen Zubia , Yves Letourneur
Scientific Reports, 2021, 11 (1), ⟨10.1038/s41598-021-00348-w⟩
Untargeted Metabolomics Reveals a Complex Impact on Different Metabolic Pathways in Scallop Mimachlamys varia (Linnaeus, 1758) after Short-Term Exposure to Copper at Environmental Dose
Vincent Hamani , Pascaline Ory , Pierre-Edouard Bodet , Laurence Murillo , Marianne Graber
Metabolites, 2021, 11 (12), pp.862. ⟨10.3390/metabo11120862⟩
Migrating curlews on schedule: departure and arrival patterns of a long-distance migrant depend on time and breeding location rather than on wind conditions
Philipp Schwemmer , Moritz Mercker , Klaus Heinrich Vanselow , Pierrick Bocher , Stefan Garthe
Movement Ecology, 2021, 9 (1), ⟨10.1186/s40462-021-00252-y⟩
Designing coastal adaptation strategies to tackle sea level rise
Théophile Bongarts Lebbe , Hélène Rey-Valette , Éric Chaumillon , Guigone Camus , Rafael Almar , Anny Cazenave , Joachim Claudet , Nicolas Rocle , Catherine Meur-Ferec , Frédérique Viard , Denis Mercier , Christine Dupuy , Frédéric Ménard , Bernardo Aliaga Rossel , Lauren Mullineaux , Marie-Alexandrine Sicre , Anna Zivian , Françoise Gaill , Agathe Euzen
Frontiers in Marine Science, 2021, 8, pp.740602. ⟨10.3389/fmars.2021.740602⟩
GPS tracking data can document wind turbine interactions: evidence from a GPS-tagged Eurasian curlew
Frédéric Jiguet , Philipp Schwemmer , Pierre Rousseau , Pierrick Bocher
Forensic Science International: Animals and Environments, 2021, 1, pp.100036. ⟨10.1016/j.fsiae.2021.100036⟩
New insights in bacterial and eukaryotic diversity of microbial mats inhabiting exploited and abandoned salterns at the Ré Island (France)
Camille Mazière , Hélène Agogué , Cristiana Cravo-Laureau , Christine Cagnon , Isabelle Lanneluc , Sophie Sablé , Ingrid Fruitier-Arnaudin , Christine Dupuy , Robert Duran
Microbiological Research, 2021, 252, ⟨10.1016/j.micres.2021.126854⟩
Timing of spring departure of long distance migrants correlates with previous year's conditions at their breeding site
Françoise Amélineau , Nicolas Delbart , Philipp Schwemmer , Riho Marja , Jérôme Fort , Stefan Garthe , Jaanus Elts , Philippe Delaporte , Pierre Rousseau , Françoise Duraffour , Pierrick Bocher
Biology Letters, 2021, 17 (9), pp.20210331. ⟨10.1098/rsbl.2021.0331⟩
Morphological, calorific and nutritive characteristics of 656 freshwater invertebrates taxa
Axelle Moreau , Christine Dupuy , Pierrick Bocher , Sébastien Farau
Biodiversity Data Journal, 2021, ⟨10.3897/BDJ.9.e70214⟩
Freshwater inflow and responses from estuaries across a climatic gradient: An assessment of northwestern Gulf of Mexico estuaries based on stable isotopes
Danielle Marshall , Megan La Peyre , Terence Palmer , Gaël Guillou , Blair Sterba‐boatwright , Jennifer Beseres Pollack , Benoit Lebreton
Limnology and Oceanography, 2021, 66 (9), pp.3568-3581. ⟨10.1002/lno.11899⟩
Susceptibility of polar cod (Boreogadus saida) to a model carcinogen
Adélaïde Lerebours , Svetlana Murzina , You Song , Knut Erik Tollefsen , Maura Benedetti , Francesco Regoli , Jeanette M Rotchell , Jasmine Nahrgang
Marine Environmental Research, 2021, 170, pp.105434. ⟨10.1016/j.marenvres.2021.105434⟩
Potential impact of photoinhibition on microphytobenthic primary production on a large intertidal mudflat
R. Savelli , J. Serôdio , P. Cugier , V. Méléder , P. Polsenaere , C. Dupuy , Vincent Le Fouest
Journal of Geophysical Research: Biogeosciences, 2021, ⟨10.1029/2021JG006443⟩
Nycthemeral Movements of Wintering Shorebirds Reveal Important Differences in Habitat Uses of Feeding Areas and Roosts
C. Jourdan , Jérôme Fort , D. Pinaud , P. Delaporte , J. Gernigon , N. Lachaussée , J.-C. Lemesle , C. Pignon-Mussaud , P. Pineau , F. Robin , P. Rousseau , P. Bocher
Estuaries and Coasts, 2021, 44 (5), pp.1454-1468. ⟨10.1007/s12237-020-00871-5⟩
Diuron effects on photosynthesis and vertical migration of microphytobenthos: Potential rapid bioassessment of herbicide toxicity in coastal sediments
Guo-Ying Du , Xue-Feng Zhong , Christine Dupuy , Shuai Che , Johann Lavaud
Marine Pollution Bulletin, 2021, 170, pp.112619. ⟨10.1016/j.marpolbul.2021.112619⟩
Site characteristics more than vegetation type influence food web structure of intertidal salt marshes
Denis Lafage , Alexandre Carpentier , Sylvain Duhamel , Christine Dupuy , Eric Feunteun , Sandric Lesourd , Julien Pétillon
Frontiers in Marine Science, 2021, 8, pp.669759. ⟨10.3389/fmars.2021.669759⟩
Shedding light on the river and sea lamprey in western European marine waters
Sophie A. M. Elliott , Noémie Deleys , Etienne Rivot , Anthony Acou , Elodie Réveillac , Laurent Beaulaton
Endangered Species Research, 2021, 44, pp.409-419. ⟨10.3354/esr01113⟩
Linking pollution and cancer in aquatic environments: A review
Ciara Baines , Adélaïde Lerebours , Frédéric Thomas , Jérôme Fort , Randel Kreitsberg , Sophie Gentès , Richard Meitern , Lauri Saks , Beata Ujvari , Mathieu Giraudeau , Tuul Sepp
Environment International, 2021, 149, pp.106391. ⟨10.1016/j.envint.2021.106391⟩
Relative abundances of benthic foraminifera in response to total organic carbon in sediments: Data from European intertidal areas and transitional waters
Vincent M.P. Bouchet , Fabrizio Frontalini , Fabio Francescangeli , Pierre-Guy Sauriau , Emmanuelle Geslin , Maria Virginia Alves Martins , Ahuva Almogi-Labin , Simona Avnaim-Katav , Letizia Di Bella , Alejandro Cearreta , Rodolfo Coccioni , Ashleigh Costelloe , Margarita Dimiza , Luciana Ferraro , Kristin Haynert , Michael Martínez-Colón , Romana Melis , Magali Schweizer , Maria Triantaphyllou , Akira Tsujimoto , Brent Wilson , Eric Armynot Du Châtelet
Data in Brief, 2021, 35, pp.106920. ⟨10.1016/j.dib.2021.106920⟩
Highly diversified habitats and resources influence habitat selection in wintering shorebirds
Clément Jourdan , Jérôme Fort , David Pinaud , Philippe Delaporte , Julien Gernigon , Stéphane Guenneteau , Loïc Jomat , Vincent Lelong , Jean-Christophe Lemesle , Frédéric Robin , Pierre Rousseau , Pierrick Bocher
Wilson journal of ornithology, 2021, 162 (3), pp.823-838. ⟨10.1007/s10336-021-01873-1⟩
Spatio-temporal drivers of microphytoplankton community in the Bay of Biscay: Do species ecological niches matter?
Emilie Houliez , Sébastien Lefebvre , Aurélie Dessier , Martin Huret , Elise Marquis , Martine Bréret , Christine Dupuy
Progress in Oceanography, 2021, 194, pp.102558. ⟨10.1016/j.pocean.2021.102558⟩
Multiple genetic marker analysis challenges the introduction history of Ulva australis (Ulvales, Chlorophyta) on French coasts
Pierre-Guy Sauriau , Manon Dartois , Vanessa Becquet , Fabien Aubert , Valérie Huet , Martine Bréret , Amélia Viricel , Eric Pante
European Journal of Phycology, 2021, 56 (4), pp.455-467. ⟨10.1080/09670262.2021.1876249⟩
A holistic investigation of tracers at population and individual scales reveals population structure for the common sole of the Eastern English Channel
Marine Randon , Elodie Réveillac , Olivier Le Pape
Estuarine, Coastal and Shelf Science, 2021, 249, pp.107096. ⟨10.1016/j.ecss.2020.107096⟩
Author Correction: Multi-trophic markers illuminate the understanding of the functioning of a remote, low coral cover Marquesan coral reef food web
Pauline Fey , Valeriano Parravicini , Daniela Bǎnaru , Jan Dierking , René Galzin , Benoit Lebreton , Tarik Meziane , Nicholas V. C. Polunin , Mayalen Zubia , Yves Letourneur
Scientific Reports, 2021, 11, ⟨10.1038/s41598-021-02477-8⟩
Premier signalement de la crevette monégasque Lysmata seticaudata (Risso, 1816) de l’île de Ré (Pertuis charentais)
Pierre-Guy Sauriau , Pierre Le Gall
An Aod - Les cahiers naturalistes de l’Observatoire marin, A paraître
First overview on trophic relationships of the invasive ctenophore Mnemiopsis leidyi in a Mediterranean coastal lagoon (Berre Lagoon, France): benthic–pelagic coupling evidenced by carbon and nitrogen stable isotope composition
Guillaume Marchessaux , Mireille Harmelin-Vivien , Mélanie Ourgaud , D. Bănaru , Loic Guilloux , Bruno Belloni , Benoit Lebreton , Gaël Guillou , Delphine Thibault
Regional Studies in Marine Science, 2021, 41, pp.101570. ⟨10.1016/j.rsma.2020.101570⟩
Oyster growth across a salinity gradient in a shallow, subtropical Gulf of Mexico estuary
Benoit Lebreton , Jennifer Beseres Pollack , Brittany Blomberg , Terence Palmer , Paul Montagna
Experimental Results, 2021, 2, ⟨10.1017/exp.2020.72⟩
Rapid responses of pristine marine planktonic communities in experimental approach to diuron and naphthalene (Juan de Nova Island, Western Indian Ocean)
Marc Bouvy , Christine Dupuy , Patrice Got , Isabelle Domaizon , Claire Carré , Marc Pagano , Didier Debroas , Cécile Roques , Christophe Leboulanger
Marine and Freshwater Research, 2021, ⟨10.1071/MF20276⟩
Indicative value of benthic foraminifera for biomonitoring: Assignment to ecological groups of sensitivity to total organic carbon of species from European intertidal areas and transitional waters
Vincent M.P. Bouchet , Fabrizio Frontalini , Fabio Francescangeli , Pierre-Guy Sauriau , Emmanuelle Geslin , Maria Virginia Alves Martins , Ahuva Almogi-Labin , Simona Avnaim-Katav , Letizia Di Bella , Alejandro Cearreta , Rodolfo Coccioni , Ashleigh Costelloe , Margarita Dimiza , Luciana Ferraro , Kristin Haynert , Michael Martínez-Colón , Romana Melis , Magali Schweizer , Maria Triantaphyllou , Akira Tsujimoto , Brent Wilson , Eric Armynot Du Châtelet
Marine Pollution Bulletin, 2021, 164, pp.112071. ⟨10.1016/j.marpolbul.2021.112071⟩
Joint flight bouts but short-term association in migrating Eurasian Curlews Numenius arquata
Frédéric Jiguet , Pierrick Bocher , Helmut Kruckenberg , Steffen Kämpfer , Etienne Debenest , Romain Lorrillière , Pierre Rousseau , Maciej Szajda , Heinz Düttmann
Bird Study, 2021, 68 (1), pp.38 - 46. ⟨10.1080/00063657.2021.1962805⟩

Ouvrage (y compris édition critique et traduction)

Marine Environmental Quality Healthy Coastal Waters
Frédéric Muttin , Hélène Thomas-Guyon
Wiley, 2021, 9781786307583. ⟨10.1002/9781119866220⟩

Communication dans un congrès

Atelier BenthOBS : XI ème atelier de taxinomie La Rochelle 13-17 décembre 2021
Pierre-Guy Sauriau , J. Jourde
Colloque ILICO / EVOLECO 2021, 2-5 nov. 2021 La Rochelle (France), IR-ILICO et UMR7266 LIENSs, Nov 2021, La Rochelle, France
Modèle de minéralisation et diagenèse des tapis microbiens stromatolithiques hypersalins en domaine marin restreint, comparaison avec les microbialithes anciens.
Aurélie Pace , Raphaël Bourillot , Emmanuelle Vennin , Anthony Bouton , Christophe Dupraz , Olivier Braissant , Thibault Duteil , Irina Bundeleva , Patricia Patrier , Pierre Sansjofre , Yusuke Yokoyama , Pieter Visscher
27e édition de la Réunion des Sciences de la Terre, SGF, CNRS, Laboratoire de Géologie de Lyon ou l’étude de la Terre, des planètes et de l’environnement, Nov 2021, Lyon, France

Liste des publications 2020 des chercheurs de l’équipe BIOFEEL référencées sous HAL :

25 résultats

2020

Article dans une revue

Complementarity and discriminatory power of genotype and otolith shape in describing the fine-scale population structure of an exploited fish, the common sole of the Eastern English Channel
Marine Randon , Olivier Le Pape , Bruno Ernande , Kélig Mahé , Filip A. M. Volckaert , Eric Petit , Gilles Lassalle , Thomas Le Berre , Elodie Réveillac
PLoS ONE, 2020, 15 (11), ⟨10.1371/journal.pone.0241429⟩
Coupling between sediment biogeochemistry and phytoplankton development in a temperate freshwater marsh (Charente-Maritime, France): Evidence of temporal pattern
Raphaël Moncelon , Marie Gouazé , Philippe Pineau , Éric Bénéteau , Martine Bréret , Olivier Philippine , François-Xavier Robin , Christine Dupuy , Édouard Metzger
Water Research, 2020, 189, pp.116567. ⟨10.1016/j.watres.2020.116567⟩
Morphology and Ecology of Two New Amoebae, Isolated From a Thalassohaline Lake, Dziani Dzaha
Willy Aucher , Vincent Delafont , Elodie Ponlaitiac , Aurélien Alafaci , Hélène Agogué , Christophe Leboulanger , Marc Bouvy , Yann Héchard
Protist, 2020, 171 (6), pp.125770. ⟨10.1016/j.protis.2020.125770⟩
Mapping the Intertidal Microphytobenthos Gross Primary Production, Part II: Merging Remote Sensing and Physical-Biological Coupled Modeling
Raphaël Savelli , Vona Méléder , Philippe Cugier , Pierre Polsenaere , Christine Dupuy , Johann Lavaud , Alexandre Barnett , Vincent Le Fouest
Frontiers in Marine Science, 2020, 7, ⟨10.3389/fmars.2020.00521⟩
Anti-Biofilm Activity of a Low Weight Proteinaceous Molecule from the Marine Bacterium Pseudoalteromonas sp. IIIA004 against Marine Bacteria and Human Pathogen Biofilms
Ibtissem Doghri , Emilie Portier , Florie Desriac , Jean Michel Zhao , Alexis Bazire , Alain Dufour , Vincent Rochette , Sophie Sablé , Isabelle Lanneluc
Microorganisms, 2020, 8 (9), pp.1295. ⟨10.3390/microorganisms8091295⟩
Satellite and in situ monitoring of Chl-a, Turbidity, and Total Suspended Matter in coastal waters: experience of the year 2017 along the French Coasts
Francis Gohin , Philippe Bryère , Alain Lefebvre , Pierre-Guy Sauriau , Nicolas Savoye , Vincent Vantrepotte , Yann Bozec , Thierry Cariou , Pascal Conan , Sylvain Coudray , Gaëlle Courtay , Sylvaine Françoise , Anne Goffart , Tania Hernández Fariñas , Maud Lemoine , Aude Piraud , Patrick Raimbault , Michael Rétho
Journal of Marine Science and Engineering, 2020, Marine Observation and Monitoring towards an Ecosystem Approach), 8 (9), pp.665. ⟨10.3390/jmse8090665⟩
Environmental Factors and Pollution Stresses Select Bacterial Populations in Association With Protists
Songbao Zou , Qianqian Zhang , Xiaoli Zhang , Christine Dupuy , Jun Gong
Frontiers in Marine Science, 2020, 7, ⟨10.3389/fmars.2020.00659⟩
Mapping the Intertidal Microphytobenthos Gross Primary Production Part I: Coupling Multispectral Remote Sensing and Physical Modeling
Vona Méléder , Raphaël Savelli , Alexandre Barnett , Pierre Polsenaere , Pierre Gernez , Philippe Cugier , Astrid Lerouxel , Anthony Le Bris , Christine Dupuy , Vincent Le Fouest , Johann Lavaud
Frontiers in Marine Science, 2020, ⟨10.3389/fmars.2020.00520⟩
Sources of organic matter in an atypical phytoplankton rich coral ecosystem, Marquesas Islands: composition and properties
P. Fey , V. Parravicini , B. Lebreton , T. Meziane , R. Galzin , M. Zubia , D. Bӑnaru , Yves Letourneur
Marine Biology, 2020, 167 (7), pp.92. ⟨10.1007/s00227-020-03703-z⟩
Lactococcus lactis Diversity Revealed by Targeted Amplicon Sequencing of purR Gene, Metabolic Comparisons and Antimicrobial Properties in an Undefined Mixed Starter Culture Used for Soft-Cheese Manufacture
Sabrina Saltaji , Olivier Rué , Valérie Sopena , Sophie Sablé , Fatoumata Tambadou , Sandrine Didelot , Romain Chevrot
Foods, 2020, 9 (5), pp.622. ⟨10.3390/foods9050622⟩
The Vertical Migratory Rhythm of Intertidal Microphytobenthos in Sediment Depends on the Light Photoperiod, Intensity, and Spectrum: Evidence for a Positive Effect of Blue Wavelengths
Alexandre Barnett , Vona Méléder , Christine Dupuy , Johann Lavaud
Frontiers in Marine Science, 2020, 7, ⟨10.3389/fmars.2020.00212⟩
Biomonitoring of Mimachlamys varia transplanted to areas impacted by human activities (La Rochelle Marina, France)
Marine Breitwieser , Marine Barbarin , Christine Plumejeaud-Perreau , Emmanuel Dubillot , Thierry Guyot , Valérie Huet , Carine Churlaud , Thibaut Coulombier , Isabelle Brenon , Denis Fichet , Nathalie Imbert , Hélène Thomas
Chemosphere, 2020, 243, pp.125199. ⟨10.1016/j.chemosphere.2019.125199⟩
Impact of human activities on the spatio-seasonal dynamics of plankton diversity in drained marshes and consequences on eutrophication
Valérie David , Sébastien Tortajada , Nicolas Savoye , Martine Bréret , Nicolas Lachaussée , Olivier Philippine , François-Xavier Robin , Christine Dupuy
Water Research, 2020, 170, pp.115287. ⟨10.1016/j.watres.2019.115287⟩
Trophic niche partitioning in marine wood-borers revealed by stable isotope analysis
François Charles , Pascal Riera , Pierre-Guy Sauriau , François Lantoine , Benoit Lebreton , Hélène Agogué , Stéphane Hourdez
Aquatic Biology, 2020, 29, pp.33-43. ⟨10.3354/ab00723⟩
Microbial functional structure and stable isotopic variation of leptocephali across three current zones in the western South Pacific
Leopold Ghinter , Christine Dupuy , Michael J Miller , Alexandre Carpentier , Christel Lefrançois , Anthony Acou , Jun Aoyama , Mari Kuroki , Camilla Liénart , Shun Watanabe , Katsumi Tsukamoto , Tsuguo Otake , Eric Feunteun
Progress in Oceanography, 2020, 182, pp.102264. ⟨10.1016/j.pocean.2020.102264⟩
Ecological succession and resilience of plankton recovering from an acute disturbance in freshwater marshes
Valérie V. David , Sébastien Tortajada , Olivier Philippine , Martine Bréret , Alexandre Barnett Barnett , Hélène Agogué , François-Xavier Robin , Christine Dupuy
Science of the Total Environment, 2020, 709, pp.135997. ⟨10.1016/j.scitotenv.2019.135997⟩
Influence of food (ciliate and phytoplankton) on the trophic transfer of inorganic and methyl-mercury in the Pacific cupped oyster Crassostrea gigas
Marc Metian , Simon Pouil , Christine Dupuy , Jean-Louis Teyssié , Michel Warnau , Paco Bustamante
Environmental Pollution, 2020, 257, pp.113503. ⟨10.1016/j.envpol.2019.113503⟩
Diet variably affects the trophic transfer of trace elements in the oyster Crassostrea gigas
Simon Pouil , Marc Metian , Christine Dupuy , Jean-Louis Teyssié , Michel Warnau , Paco Bustamante
Marine Environmental Research, 2020, 161, pp.105124. ⟨10.1016/j.marenvres.2020.105124⟩
New insights in the biogeographical distributions of two Spionidae (Annelida) from the NE Atlantic and Mediterranean French coasts
J. Jourde , Nicolas Lavesque , Céline Labrune , Jean Michel Amouroux , Paulo Bonifácio , Suzie Humbert , Bastien Lamarque , Pierre-Guy Sauriau , Karin Meissner
Zoosymposia, 2020, 13th International Polychaetes Conference (IPC13), 19, pp.173-184. ⟨10.11646/zoosymposia.19.1.18⟩
Antibiofilm activity in the culture supernatant of a marine Pseudomonas sp. bacterium
Ibtissem Doghri , Florence Brian-Jaisson , Marianne Graber , Alexis Bazire , Alain Dufour , Marie-Noelle M.-N. Bellon-Fontaine , Jean-Marie Herry , Ana Caroline Ferro , Valérie Sopena , Isabelle Lanneluc , Sophie Sablé
Microbiology, 2020, 166 (3), ⟨10.1099/mic.0.000878⟩
Biomineralization of calcium carbonate by marine bacterial strains isolated from calcareous deposits
Julia Vincent , René Sabot , Isabelle Lanneluc , Philippe Refait , Philippe Turcry , Pierre-Yves Mahieux , Marc Jeannin , Sophie Sablé
Matériaux & Techniques, 2020, 108 (3), pp.302. ⟨10.1051/mattech/2020027⟩
Maturation of the European sardine Sardina pilchardus under experimental conditions strengthens bioenergetic estimate
Marie Vagner , Aurélie Dessier , Christine Dupuy , Paco Bustamante , Emmanuel Dubillot , Christel Lefrançois , Elodie Réveillac , Pierre Morinière , Sébastien Lefebvre
Marine Environmental Research, 2020, 160, pp.104985. ⟨10.1016/j.marenvres.2020.104985⟩
Investigation into the illegal killing of a tagged Eurasian Curlew
Frédéric Jiguet , Dylan Duby , Aude Bourgeois , Frédéric Robin , Pierre Rousseau , Griet Nijs , Jérôme Fuchs , Romain Lorrillière , Pierrick Bocher
Forensic Science International: Animals and Environments, 2020, 1, pp.100005. ⟨10.1016/j.fsiae.2021.100005⟩
Geochemistry of an endorheic thalassohaline ecosystem: the Dziani Dzaha crater lake (Mayotte Archipelago, Indian Ocean)
Gérard Sarazin , Didier Jézéquel , Christophe Leboulanger , Eric Fouilland , Emilie Le Floc'H , Marc Bouvy , Emmanuelle Gérard , Hélène Agogué , Cécile Bernard , Mylène Hugoni , Vincent Grossi , Marc Troussellier , Magali Ader
Comptes Rendus Géoscience, 2020, ⟨10.5802/crgeos.43⟩
Quantitative food web modeling unravels the importance of the microphytobenthos-meiofauna pathway for a high trophic transfer by meiofauna in soft-bottom intertidal food webs
Luuk Hendrikus van Der Heijden , Nathalie Niquil , M. Haraldsson , R.M. Asmus , S.R. Pacella , M. Graeve , J. Rzeznik-Orignac , H. Asmus , B. Saint-Béat , B. Lebreton
Ecological Modelling, 2020, 430, ⟨10.1016/j.ecolmodel.2020.109129⟩

Liste des publications 2019 des chercheurs de l’équipe BIOFEEL référencées sous HAL :

26 résultats

2019

Article dans une revue

Impact of Chronic and Massive Resuspension Mechanisms on the Microphytobenthos Dynamics in a Temperate Intertidal Mudflat
R. Savelli , Xavier Bertin , F. Orvain , P. Gernez , A. Dale , T. Coulombier , P. Pineau , N. Lachaussée , P. Polsenaere , C. Dupuy , Vincent Le Fouest
Journal of Geophysical Research: Biogeosciences, 2019, ⟨10.1029/2019JG005369⟩
Meiofauna versus macrofauna as a food resource in a tropical intertidal mudflat
Pierre-Yves Pascal , Pierrick Bocher , Christel Lefrançois , Hien Duy Nguyen , Johan Chevalier , Christine Dupuy
Marine Biology, 2019, 166 (11), pp.144. ⟨10.1007/s00227-019-3588-z⟩
Benthic trophic networks of the southern North Sea: contrasting soft-sediment communities share high food web similarity
J. Steger , H Pehlke , B. Lebreton , T Brey , J Dannheim
Marine Ecology Progress Series, 2019, 628, pp.17-36. ⟨10.3354/meps13069⟩
Salinity disturbance affects faunal community composition and organic matter on a restored Crassostrea virginica oyster reef
Danielle Aguilar Marshall , Benoit Lebreton , Terence A Palmer , Kevin de Santiago , Jennifer Beseres Pollack
Estuarine, Coastal and Shelf Science, 2019, 226, pp.106267. ⟨10.1016/j.ecss.2019.106267⟩
Laticorophium baconi (Shoemaker, 1934) (Crustacea: Amphipoda: Corophiidae: Corophiini): first record in European marine waters
Benoit Gouillieux , Pierre-Guy Sauriau
BioInvasions Records, 2019, 8 (4), pp.848-861. ⟨10.3391/bir.2019.8.4.13⟩
Ecosystem resilience following salinity change in a hypersaline estuary
Natasha Breaux , Benoit Lebreton , Terence A Palmer , Gael Guillou , Jennifer Beseres Pollack
Estuarine, Coastal and Shelf Science, 2019, 225, pp.106258. ⟨10.1016/j.ecss.2019.106258⟩
Trophic importance of microphytobenthos and bacteria to meiofauna in soft-bottom intertidal habitats: A combined trophic marker approach
L.H. van Der Heijden , M. Graeve , R. Asmus , J. Rzeznik-Orignac , N. Niquil , Q. Bernier , G. Guillou , H. Asmus , B. Lebreton
Marine Environmental Research, 2019, 149, pp.50-66. ⟨10.1016/j.marenvres.2019.05.014⟩
Variation of isotope composition in kelps from Kongsfjorden (Svalbard)
Cornelia Buchholz , Benoit Lebreton , Inka Bartsch , Christian Wiencke
Marine Biology, 2019, 166 (6), pp.71. ⟨10.1007/s00227-019-3513-5⟩
Fish facing global change: are early stages the lifeline?
Marie Vagner , Jose-Luis Zambonino-Infante , David Mazurais
Marine Environmental Research, 2019, 147, pp.159-178. ⟨10.1016/j.marenvres.2019.04.005⟩
Food sources of macrozoobenthos in an Arctic kelp belt: trophic relationships revealed by stable isotope and fatty acid analyses
Martin Paar , B. Lebreton , M. Graeve , M Greenacre , R. Asmus , H. Asmus
Marine Ecology Progress Series, 2019, 615, pp.31-49. ⟨10.3354/meps12923⟩
From ecological relevance of the ecosystem services concept to its socio-political use. The case study of intertidal bare mudflats in the Marennes-Oléron Bay, France
Benoit Lebreton , Audrey Rivaud , Laurent Picot , Benoît Prévost , Laurent Barillé , Thierry Sauzeau , Jennifer Beseres Pollack , Johann Lavaud
Ocean and Coastal Management, 2019, 172, pp.41-54. ⟨10.1016/j.ocecoaman.2019.01.024⟩
Influence of sudden salinity variation on the physiology and domoic acid production by two strains of Pseudo-nitzschia australis
Nour Ayache , Fabienne Hervé , Véronique Martin-Jézéquel , Zouher Amzil , Amandine Caruana
Journal of Phycology, 2019, 55 (1), pp.186-195. ⟨10.1111/jpy.12801⟩
Arctic climate change and pollution impact little auk foraging and fitness across a decade
Françoise Amélineau , David Grémillet , Ann Harding , Wojciech Walkusz , Rémi Choquet , Jérôme Fort
Scientific Reports, 2019, 9, ⟨10.1038/s41598-018-38042-z⟩
Inventory and new records of benthic Amphipods from macrophytes and fine sand communities of the Bizerte lagoon (Tunisia, SW Mediterranean Sea)
Marwa Khammassi , Jérôme Jourde , Wahiba Zaabar , Sarra Laabidi , Pierre-Guy Sauriau , Mohamed Sghaier Achouri
Marine Biodiversity Records, 2019, 12 (24), ⟨10.1186/s41200-019-0182-5⟩
Ocean warming combined with lower omega-3 nutritional availability impairs the cardio-respiratory function of a marine fish
Marie Vagner , Eric Pante , Amelia Viricel , Thomas Lacoue-Labarthe , Jose-Luis Zambonino-Infante , Patrick Quazuguel , Emmanuel Dubillot , Valerie Huet , Herve Le Delliou , Christel Lefrançois , Nathalie Imbert-Auvray
Journal of Experimental Biology, 2019, 222 (8), pp.jeb187179. ⟨10.1242/jeb.187179⟩
Ocean warming combined with lower omega-3 nutritional availability impairs the cardio-respiratory function of a marine fish
Marie Vagner , Eric Pante , Amélia Viricel , Thomas Lacoue-Labarthe , Jose-Luis Zambonino-Infante , Patrick Quazuguel , Emmanuel Dubillot , Valérie Huet , Hervé Le Delliou , Christel Lefrançois , Nathalie Imbert-Auvray
Journal of Experimental Biology, 2019, 222 (8), pp.jeb187179. ⟨10.1242/jeb.187179⟩
Very Low Phytoplankton Diversity in a Tropical Saline-Alkaline Lake, with Co-dominance of Arthrospira fusiformis (Cyanobacteria) and Picocystis salinarum (Chlorophyta)
Cécile Bernard , Arthur Escalas , Nicolas Villeriot , Hélène Agogué , Mylène Hugoni , Charlotte Duval , Claire Carré , Patrice Got , Gérard Sarazin , Didier Jézéquel , Christophe Leboulanger , Vincent Grossi , Maga Ader , Marc Troussellier
Microbial ecology, 2019, 78 (3), pp.603-617. ⟨10.1007/s00248-019-01332-8⟩
Modelling the functioning of a coupled microphytobenthic-EPS-bacterial system in intertidal mudflats
C. Rakotomalala , Katell Guizien , K. Grangeré , S. Lefebvre , C. Dupuy , F. Orvain
Marine Environmental Research, 2019, 150, pp.104754. ⟨10.1016/j.marenvres.2019.104754⟩

Chapitre d'ouvrage

On the iron-sulphur interactions involved in biocorrosion phenomena
Philippe Refait , Marc Jeannin , René Sabot , Sophie Sablé , Isabelle Lanneluc , Alexandre Romaine , Sophia Necib , Samuel Pineau
Interactions Materials-Microorganisms. Concretes and Metals more Resistant to Biodeterioration, 2019, ⟨10.1051/978-2-7598-2317-8.c014⟩
Biofilms in a marine environment: example of intertidal mudflats and metallic port structures
Sophie Sablé , Philippe Refait , René Sabot , Marc Jeannin , Ibtissem Doghri , Mikaël Langumier , Isabelle Lanneluc
Interactions Materials-Microorganisms. Concretes and Metals more Resistant to Biodeterioration, 2019, ⟨10.1051/978-2-7598-2317-8.c010⟩
Food web structure of a Mediterranean coralligenous ecosystem
Bruno Belloni , Stéphane Sartoretto , Pierre Cresson , Marc Bouchoucha , Gael Guillou , Benoit Lebreton , S. Ruitton , Mireille Harmelin-Vivien
Proceedings of the 3rd symposium on the conservation of the coralligenous and other calcareous bio-constructions, Antalya, Turkey, 15-16 January 2019, LANGAR H., OUERGHI A. (eds.), RAC/SPA publ., Tunis: 30-35., pp.30-35, 2019

Communication dans un congrès

Stratégie d’analyse d’une contamination fécale (bactéries et virus) dans un espace littoral interdit à la baignade : cas de la baie d’Aytré (Charente-Maritime, France)
Méry Ndione , Hélène Agogué , Tony Agion , Michael Treilles , Luc Vacher , Hélène Montanié
Congrès de Société Française de Microbiologie (SFM), Oct 2019, Paris, France
Effet combiné de la température et de la disponibilité en oméga 3 dans la nourriture sur la fonction cardio-respiratoire du mulet doré
Marie Vagner , Eric Pante , Amelia Viricel , Thomas Lacoue-Labarthe , Jose-Luis Zambonino-Infante , Patrick Quazuguel , Emmanuel Dubillot , Valérie Huet , Hervé Le Delliou , Christel Lefrançois , Nathalie Imbert-Auvray
Colloque d'Ecophysiologie Animale, Oct 2019, Rennes, France
Meiofauna versus macrofauna as food resource in a tropical intertidal mudflat
Pierre Yves Pascal , Pierrick Bocher , Christel Lefrançois , Hien T. Nguyen , Johan Chevalier , Christine Dupuy
Caribbean Science and Innovation Meeting 2019, Oct 2019, Pointe-à-Pitre (Guadeloupe), France
Biomagnification of contaminants in a marine food web (NW Mediterranean Sea): speciation of arsenic and mercury toxic forms
Daniela Bănaru , Marie Desgranges , Aurélie Dufour , Paco Bustamante , Carine Churlaud , Benoit Lebreton , Gael Guillou , Florence Pannier , Mireille Harmelin-Vivien
ICMGP 2019 Conference, Poland, Sep 2019, Krakow, Poland
Preparation for Oxidative Stress: Evolution, Ecophysiology and Molecular Mechanisms
Céline Audet , Denis Chabot , Yvan Lambert , Aurélie Dupont-Prinet , Marie Vagner
International congress of comparative physiology and biochemistry, Aug 2019, Ottawa, Canada

Liste des publications 2018 des chercheurs de l’équipe BIOFEEL référencées sous HAL :

32 résultats

2018

Article dans une revue

On biotic and abiotic drivers of the microphytobenthos seasonal cycle in a temperate intertidal mudflat: a modelling study
Raphaël Savelli , Christine Dupuy , Laurent Barillé , Astrid Lerouxel , Katell Guizien , Anne Philippe , Pierrick Bocher , Pierre Polsenaere , Vincent Le Fouest
Biogeosciences, 2018, 15 (23), pp.7243-7271. ⟨10.5194/bg-15-7243-2018⟩
Spatiotemporal variations in microbial diversity across the three domains of life in a tropical thalassohaline lake (Dziani Dzaha, Mayotte Island)
Mylène Hugoni , Arthur Escalas , Cécile Bernard , Sébastien Nicolas , Didier Jezequel , Fanny Vazzoler , Gérard Sarazin , Christophe Leboulanger , Marc Bouvy , Patrice Got , Magali Ader , Marc Troussellier , Hélène Agogué
Molecular Ecology, 2018, 27 (23), pp.4775-4786. ⟨10.1111/mec.14901⟩
There's no harm in having too much: A comprehensive toolbox of methods in trophic ecology
Nabil Majdi , Nicolas Hette-Tronquart , Etienne Auclair , Alexandre Bec , Tiphaine Chouvelon , Bruno Cognie , Michaël Danger , Priscilla Decottignies , Aurélie Dessier , Christian Desvilettes , Stanislas Dubois , Christine Dupuy , Clémentine Fritsch , Cédric Gaucherel , Mickael Hedde , Franck Jabot , Sébastien Lefebvre , Martin P Marzloff , Benjamin Pey , Nathalie Dubois Peyrard Peyrard , Thibaut Powolny , Régis Sabbadin , Elisa Thébault , Marie-Elodie Perga
Food Webs, 2018, 17, pp.e00100-. ⟨10.1016/j.fooweb.2018.e00100⟩
Population structure and genetic diversity in the variegated scallop, Mimachlamys varia (Linnaeus, 1758), a novel bioindicator of chemical pollution on the French coastline
Marine Breitwieser , Vanessa Becquet , Hélène Thomas-Guyon , Valentin Pillet , Pierre-Guy Sauriau , Marianne Graber , Amélia Viricel
Journal of Molluscan Studies, 2018, 84 (4), pp.417-425. ⟨10.1093/mollus/eyy035⟩
Structural and functional similarity of epibenthic communities on standing and reefed platforms in the northwestern Gulf of Mexico
Ryan Rezek , Benoit Lebreton , Terence A Palmer , Gregory Stunz , Jennifer Beseres Pollack
Progress in Oceanography, 2018, 168, pp.145 - 154. ⟨10.1016/j.pocean.2018.09.020⟩
How do food sources drive meiofauna community structure in soft-bottom coastal food webs?
L.H. van Der Heijden , J. Rzeznik-Orignac , R. Asmus , D. Fichet , M. Bréret , P. Kadel , L. Beaugeard , H. Asmus , B. Lebreton
Marine Biology, 2018, 165 (10), pp.166. ⟨10.1007/s00227-018-3419-7⟩
Variability of energy density among mesozooplankton community: new insights in functional diversity to forage fish
Aurélie Dessier , Christine Dupuy , Anaïs Kerric , Françoise Mornet , Matthieu Authier , Paco Bustamante , Jérôme Spitz
Progress in Oceanography, 2018, 166, pp.121-128. ⟨10.1016/j.pocean.2017.10.009⟩
Monitoring small pelagic fish in the Bay of Biscay ecosystem, using indicators from an integrated survey
Mathieu Doray , Pierre Petitgas , Martin Huret , Erwan Duhamel , Jean Baptiste Romagnan , Matthieu Authier , Christine Dupuy , Jérôme Spitz
Progress in Oceanography, 2018, 166, pp.168-188. ⟨10.1016/j.pocean.2017.12.004⟩
The PELGAS survey: Ship-based integrated monitoring of the Bay of Biscay pelagic ecosystem
Mathieu Doray , Pierre Petitgas , Jean-Baptiste Romagnan , Martin Huret , Erwan Duhamel , Christine Dupuy , Jérôme Spitz , Matthieu Authier , Florence Sanchez , Laurent Berger , Ghislain Dorémus , Paul Bourriau , Patrick Grellier , Jacques Masse
Progress in Oceanography, 2018, 166, pp.15-29. ⟨10.1016/j.pocean.2017.09.015⟩
The spring mesozooplankton variability and its relationship with hydrobiological structure over year-to-year changes (2003–2013) in the southern Bay of Biscay (Northeast Atlantic)
Aurélie Dessier , Paco Bustamante , Tiphaine Chouvelon , Martin Huret , Marc Pagano , Elise Marquis , Frederic Rousseaux , Cécilia Pignon-Mussaud , Françoise Mornet , Christine Dupuy
Progress in Oceanography, 2018, 166, pp.76-87. ⟨10.1016/j.pocean.2018.04.011⟩
Coccolith-derived turbidity and hydrological conditions in May in the Bay of Biscay
Laurie Perrot , Francis Gohin , Diana Ruiz-Pino , Luis Lampert , Martin Huret , Aurélie Dessier , Pascale Malestroit , Christine Dupuy , Paul Bourriau
Progress in Oceanography, 2018, 166, pp.42-53. ⟨10.1016/j.pocean.2017.12.008⟩
Dietary composition of black drum Pogonias cromis in a hypersaline estuary reflects water quality and prey availability
Kathryn Rubio , Matthew Ajemian , Gregory Stunz , Terence A Palmer , Benoit Lebreton , Jennifer Beseres Pollack
Journal of Fish Biology, 2018, 93 (2), pp.250 - 262. ⟨10.1111/jfb.13654⟩
Characterization of phototrophic microorganisms and description of new cyanobacteria isolated from the saline-alkaline crater-lake Dziani Dzaha (Mayotte, Indian Ocean)
Maria Cellamare , Charlotte Duval , Yannick Drelin , Chakib Djediat , Nour Touibi , Hélène Agogué , Christophe Leboulanger , Magali Ader , Cécile Bernard
FEMS Microbiology Ecology, 2018, 94 (8), pp.fiy108. ⟨10.1093/femsec/fiy108⟩
Habitats marins et estuariens de l’estuaire de la Gironde : bilan des connaissances et cartographie NATURA 2000
Pierre-Guy Sauriau , Hugues Blanchet
Revue Paralia, 2018, XV èmes Journées Nationales Génie Côtier – Génie Civil La Rochelle, 29 au 31 mai 2018 pp.703-716. ⟨10.5150/jngcgc.2018.081⟩
Dynamics of particulate organic matter composition in coastal systems: Forcing of spatio-temporal variability at multi-systems scale
Camilla Liénart , Nicolas Savoye , Valérie V. David , Pierre Ramond , Paco Rodriguez Tress , Vincent Hanquiez , Vincent Marieu , Sébastien Aubin , Fabien Aubert , Sabrina Bichon , Christophe Boinet , Line Bourasseau , Yann Bozec , Martine Bréret , Elsa Breton , Jocelyne Caparros , Thierry Cariou , Pascal Claquin , Pascal Conan , Anne-Marie Corre , Laurence Costes , Muriel Crouvoisier , Yolanda del Amo , Hervé Derriennic , Francois Dindinaud , Robert Duran , Maïa Durozier , Jérémy Devesa , Sophie Ferreira , Eric Feunteun , Nicole Garcia , Sandrine Geslin , Emilie Grossteffan , Aurore Gueux , Julien Guillaudeau , Gael Guillou , Orianne Jolly , Nicolas Lachaussée , Michel Lafont , Véronique Lagadec , Jézabel Lamoureux , Béatrice Lauga , Benoit Lebreton , Eric Lecuyer , Jean-Paul Lehodey , Cédric Leroux , Stéphane L'Helguen , Éric Macé , Eric Maria , Laure Mousseau , Antoine Nowaczyk , Philippe Pineau , Franck Petit , Mireille Pujo-Pay , Patrick Raimbault , Peggy Rimmelin-Maury , Vanessa Rouaud , Pierre-Guy Sauriau , Emmanuelle Sultan , Nicolas Susperregui
Progress in Oceanography, 2018, 162, pp.271-289. ⟨10.1016/j.pocean.2018.02.026⟩
Tracing changes in the diet and habitat use of black-tailed godwits in Western France, using a stable isotope approach
Frédéric Robin , Philippe Delaporte , Pierre Rousseau , Francis Meunier , Pierrick Bocher
Isotopes in Environmental and Health Studies, 2018, 54 (3), pp.288-303. ⟨10.1080/10256016.2018.1430031⟩
Diel rhythm does not shape the vertical distribution of bacterial and archaeal 16S rRNA transcript diversity in intertidal sediments: a mesocosm study Running title: Diel activities of benthic Bacteria and Archaea
Céline Lavergne , Mylène Hugoni , Cédric Hubas , Didier Debroas , Christine Dupuy , Hélène Agogué
Microbial ecology, 2018, 75 (2), pp.364-374. ⟨10.1007/s00248-017-1048-1⟩
Stable isotope composition and parasitic infections of harbor seal young-of-the-year used as prey-based diet indicators
Camille de La Vega , Benoit Lebreton , Kristina Lehnert , Ragnhild Asmus , Ursula Siebert , Harald Asmus
Marine Mammal Science, 2018, 34 (1), pp.7 - 26. ⟨10.1111/mms.12433⟩
Subtidal Microphytobenthos: A Secret Garden Stimulated by the Engineer Species Crepidula fornicata
Thibault Androuin , Lubos Polerecky , Priscilla Decottignies , Stanislas Dubois , Christine Dupuy , Cédric Hubas , Bruno Jesus , Erwan Le Gall , Martin P Marzloff , Antoine Carlier
Frontiers in Marine Science, 2018, 5, pp.475. ⟨10.3389/fmars.2018.00475⟩
Trace elements in invertebrates and fish from Kerguelen waters, southern Indian Ocean
Caio C Cipro , Y. Cherel , P. Bocher , F. Caurant , Pierre Miramand , P. Bustamante
Polar Biology, 2018, 41 (1), pp.175-191. ⟨10.1007/s00300-017-2180-6⟩
Sources partitioning in the diet of the shipworm Bankia carinata (J.E. Gray, 1827): An experimental study based on stable isotopes
François Charles , Pierre-Guy Sauriau , Fabien Aubert , Benoit Lebreton , François Lantoine , Pascal Riera
Marine Environmental Research, 2018, 142, pp.208-213. ⟨10.1016/j.marenvres.2018.10.009⟩
Mercury in blue shark (Prionace glauca) and shortfin mako (Isurus oxyrinchus) from north-eastern Atlantic: Implication for fishery management
Sebastian Biton-Porsmoguer , Daniela Bănaru , Charles F. Boudouresque , Ivan Dekeyser , Marc Bouchoucha , Francoise Marco-Miralles , Benoit Lebreton , Gael Guillou , Mireille Harmelin-Vivien
Marine Pollution Bulletin, 2018, 127, pp.131-138. ⟨10.1016/j.marpolbul.2017.12.006⟩
First evidence of the presence and activity of archaeal C3 group members in an Atlantic intertidal mudflat
Céline Lavergne , Mylène Hugoni , Christine Dupuy , Hélène Agogué
Scientific Reports, 2018, 8 (1), pp.11790. ⟨10.1038/s41598-018-30222-1⟩
The same but different: stable isotopes reveal two distinguishable, yet similar, neighbouring food chains in a coral reef
Baptiste Lebourg , Yves Letourneur , Daniela Bănaru , Jean Blanchot , Cristele Chevalier , Gérard Mou-Tham , Benoit Lebreton , M. Pagano
Journal of the Marine Biological Association of the UK, 2018, 98 (7), pp.1589-1597. ⟨10.1017/S0025315417001370⟩
Trace elements in a Mediterranean scorpaenid fish: Bioaccumulation processes and spatial variations
Melanie Ourgaud , Sandrine Ruitton , Hugo Bourgogne , Paco Bustamante , Carine Churlaud , Gaël Guillou , Benoit Lebreton , Mireille Harmelin-Vivien
Progress in Oceanography, 2018, 163, pp.184-195. ⟨10.1016/j.pocean.2017.11.008⟩
Stable isotopes as tracers can reveal resource allocation in juvenile golden gray mullets (Liza aurata, Risso, 1810)
S. Como , Alexandra Carpentier , F. Rossi , C. Dupuy , P. Richard , E. Feunteun , C. Lefrançois
Journal of Experimental Marine Biology and Ecology, 2018, 503, pp.72-79. ⟨10.1016/j.jembe.2018.01.009⟩
Ecosystem spatial structure revealed by integrated survey data
Pierre Petitgas , Martin Huret , Christine Dupuy , Jérôme Spitz , Matthieu Authier , Jean Baptiste Romagnan , Mathieu Doray
Progress in Oceanography, 2018, ⟨10.1016/j.pocean.2017.09.012⟩
Towards an assessment of riverine dissolved organic carbon in surface waters of the western Arctic Ocean based on remote sensing and biogeochemical modeling
Vincent Le Fouest , Atsushi Matsuoka , Manfredi Manizza , Mona Shernetsky , Bruno Tremblay , Marcel Babin
Biogeosciences, 2018, 15 (5), pp.1335 - 1346. ⟨10.5194/bg-15-1335-2018⟩
Key Role of Alphaproteobacteria and Cyanobacteria in the Formation of Stromatolites of Lake Dziani Dzaha (Mayotte, Western Indian Ocean)
Emmanuelle Gérard , Siham de Goeyse , Mylène Hugoni , Hélène Agogué , Laurent Richard , Vincent Milesi , François Guyot , Léna Lecourt , Stephan Borensztajn , Marie-Béatrice Joseph , Thomas Leclerc , Gérard Sarazin , Didier Jézéquel , Christophe Leboulanger , Magali Ader
Frontiers in Microbiology, 2018, 9, pp.796. ⟨10.3389/fmicb.2018.00796⟩
The effects of grazing by the golden grey mullet Liza aurata on microphytobenthos in intertidal mudflats: evidences from mesocosm experiments
Serena Como , E Maggi , C Lefrancois , C. Fontaine , F Antognarelli , P Richard , C Dupuy
Marine Biology, 2018

Chapitre d'ouvrage

Antimicrobial and Antibiofilm Molecules Produced by Marine Bacteria
Florie Desriac , Sophie Rodrigues , Ibtissem Doghri , Sophie Sablé , Isabelle Lanneluc , Yannick Fleury , Alexis Bazire , Alain Dufour
Blue Biotechnology: Production and Use of Marine Molecules, 2018
Zones Humides : des écosystèmes riches mais menacés
L. Anras , Laure Carassou , C. Dupuy , S. Ferrari , O. Philippine , F.X. Robin , N. Lhéritier , B. Sautour
Dupuy, C.; Ferrari, S. Anticiper les changements climatiques en Nouvelle Aquitaine pour agir dans les territoires, Nouvelle Aquitaine, pp.331-361, 2018, Prévoir pour agir n°2, ISBN 978-2-9564516-0-0

Liste des publications 2017 des chercheurs de l’équipe BIOFEEL référencées sous HAL :

25 résultats

2017

Article dans une revue

Ecological structure and function in a restored versus natural salt marsh
Ryan Rezek , Benoit Lebreton , Blair Sterba-Boatwright , Jennifer Beseres Pollack
PLoS ONE, 2017, 12 (12), pp.e0189871. ⟨10.1371/journal.pone.0189871⟩
Effect of bacteria on growth and biochemical composition of two benthic diatoms Halamphora coffeaeformis and Entomoneis paludosa
Thierry Jauffrais , Hélène Agogué , Marin-Pierre Gemin , Laureen Beaugeard , Véronique Martin-Jézéquel
Journal of Experimental Marine Biology and Ecology, 2017, 495, pp.65 - 74. ⟨10.1016/j.jembe.2017.06.004⟩
Dynamics of particulate organic matter composition in coastal systems: a spatio-temporal study at multi-systems scale
Camilla Liénart , Nicolas Savoye , Yann Bozec , Elsa Breton , Pascal Conan , Valérie David , Eric Feunteun , Karine Grangeré , Philippe Kerhervé , Benoit Lebreton , Sébastien Lefebvre , Stéphane L'Helguen , Laure Mousseau , Patrick Raimbault , Pierre Richard , Pascal Riera , Pierre-Guy Sauriau , Gauthier Schaal , Fabien Aubert , Sébastien Aubin , Sabrina Bichon , Christophe Boinet , Line Bourasseau , Martine Bréret , Jocelyne Caparros , Thierry Cariou , Karine Charlier , Pascal Claquin , Vincent Cornille , Anne-Marie Corre , Laurence Costes , Olivier Crispi , Muriel Crouvoisier , Marie Czamanski , Yolanda del Amo , Hervé Derriennic , Francois Dindinaud , Maïa Durozier , Vincent Hanquiez , Antoine Nowaczyk , Jérémy Devesa , Sophie Ferreira , Michel Fornier , Fabrice Garcia , Nicole Garcia , Sandrine Geslin , Emilie Grossteffan , Aurore Gueux , Julien Guillaudeau , Gaël Guillou , Orianne Joly , Nicolas Lachaussée , Michel Lafont , Jézabel Lamoureux , Eric Lecuyer , Jean-Paul Lehodey , David Lemeille , Cédric Leroux , Eric Macé , Eric Maria , Philippe Pineau , Franck Petit , Mireille Pujo-Pay , Peggy Rimelin-Maury , Emmanuelle Sultan
Progress in Oceanography, 2017, 156, pp.221-239. ⟨10.1016/j.pocean.2017.03.001⟩
Response of CO 2 -starved diatom Phaeodactylum tricornutum to light intensity transition
Parisa Heydarizadeh , Wafâa Boureba , Morteza Zahedi , Bing Huang , Brigitte Moreau , Ewa Lukomska , Aurélie Couzinet-Mossion , Gaëtane Wielgosz-Collin , Véronique Martin-Jézéquel , Gaël Bougaran , Justine Marchand , Benoît Schoefs
Philosophical Transactions of the Royal Society B: Biological Sciences, 2017, 372 (1728), pp.20160396. ⟨10.1098/rstb.2016.0396⟩
Microphytobenthos and an indicator of environmental quality status in intertidal flats: Case study of coastal ecosystem in Pertuis Charentais, France
Guoying Du , Hongmei Yan , Christine Dupuy
Estuarine, Coastal and Shelf Science, 2017, ⟨10.1016/j.ecss.2017.06.031⟩
Does reef structure affect oyster food resources? A stable isotope assessment
Brittany A Blomberg , Benoit Lebreton , Terence A. Palmer , Gaël Guillou , Jennifer Beseres Pollack , Paul A. Montagna
Marine Environmental Research, 2017, 127, pp.32 - 40. ⟨10.1016/j.marenvres.2017.03.003⟩
Essence of the patterns of cover and richness of intertidal hard bottom communities: a pan-European study
Jonne Kotta , Helen Orav-Kotta , Holger Jänes , Herman Hummel , Christos Arvanitidis , Pim van Avesaath , Guy Bachelet , Lisandro Benedetti-Cecchi , Natalia Bojanić , Serena Como , Stefania Coppa , Jennifer Coughlan , Tasman Crowe , Martina Dal Bello , Steven Degraer , Jose Antonio Juanes de La Pena , Valentina Kirienko Fernandes de Matos , Free Espinosa , Sarah Faulwetter , Matt Frost , Xabier Guinda , Emilia Jankowska , J. Jourde , Francis Kerckhof , Nicolas Lavesque , Jean-Charles Leclerc , Paolo Magni , Christina Pavloudi , Maria Luiza Pedrotti , Ohad Peleg , Angel Perez-Ruzafa , Araceli Puente , Pedro Ribeiro , Gil Rilov , Maria Rousou , Tomas Ruginis , Teresa Silva , Nathalie Simon , Isabel Sousa-Pinto , Jesús Troncoso , Jan Warzocha , Jan Marcin Weslawski
Journal of the Marine Biological Association of the UK, 2017, 97 (3), pp.525-538. ⟨10.1017/S0025315416001351⟩
Consistent patterns of spatial variability between NE Atlantic and Mediterranean rocky shores
Martina Dal Bello , Jean-Charles Leclerc , Lisandro Benedetti-Cecchi , Giuseppe Andrea de Lucia , Christos Arvanitidis , Pim van Avesaath , Guy Bachelet , Natalia Bojanic , Serena Como , Stefania Coppa , Jennifer Coughlan , Tasman Crowe , Steven Degraer , Free Espinosa , Sarah Faulwetter , Matt Frost , Xabier Guinda , Emilia Jankowska , J. Jourde , Jose Antonio Juanes de La Pena , Francis Kerckhof , Jonne Kotta , Nicolas Lavesque , Paolo Magni , Valentina de Matos , Helen Orav-Kotta , Christina Pavloudi , Maria Luiza Pedrotti , Ohad Peleg , Angel Perez-Ruzafa , Araceli Puente , Pedro Ribeiro , Fabienne Rigaut-Jalabert , Gil Rilov , Maria Rousou , Marcos Rubal , Tomas Ruginis , Teresa Silva , Nathalie Simon , Isabel Sousa-Pinto , Jesús Troncoso , Jan Warzocha , Jan Marcin Weslawski , Herman Hummel
Journal of the Marine Biological Association of the UK, 2017, 97 (3), pp.539-547. ⟨10.1017/S0025315416001491⟩
The role of physical variables in biodiversity patterns of intertidal macroalgae along European coasts
Araceli Puente , Xabier Guinda , Jose Juanes , Elvira Ramos , Beatriz Echavarri-Erasun , Camino de La Hoz , Steven Degraer , Francis Kerckhof , Natalia Bojanić , Maria Rousou , Helen Orav-Kotta , Jonne Kotta , J. Jourde , Maria Luiza Pedrotti , Jean-Charles Leclerc , Nathalie Simon , Guy Bachelet , Nicolas Lavesque , Christos Arvanitidis , Christina Pavloudi , Sarah Faulwetter , Tasman Crowe , Jennifer Coughlan , Lisandro Benedetti Cecchi , Martina Dal Bello , Paolo Magni , Serena Como , Stefania Coppa , Giuseppe Andrea de Lucia , Tomas Rugins , Emilia Jankowska , Jan Marcin Weslawski , Jan Warzocha , Teresa Silva , Pedro Ribeiro , Valentina de Matos , Isabel Sousa-Pinto , Jesús Troncoso , Ohad Peleg , Gil Rilov , Free Espinosa , Angel Pérez Ruzafa , Matt Frost , Herman Hummel , Pim van Avesaath
Journal of the Marine Biological Association of the UK, 2017, 97 (3), pp.549-560. ⟨10.1017/S0025315416001673⟩
Trophic position increases with thermocline depth in yellowfin and bigeye tuna across the Western and Central Pacific Ocean
Patrick Houssard , Anne Lorrain , Laura Tremblay-Boyer , Valérie Allain , Brittany S. Graham , Christophe E. Menkès , Heidi R. Pethybridge , Lydie I.E. Couturier , David Point , Bruno Leroy , Aurore Receveur , Brian P.V. Hunt , Elodie Vourey , Sophie Bonnet , Martine Rodier , Patrick Raimbault , Eric Feunteun , Petra M. Kuhnert , Jean-Marie Munaron , Benoit Lebreton , Tsuguo Otake , Yves Letourneur
Progress in Oceanography, 2017, 154, pp.49 - 63. ⟨10.1016/j.pocean.2017.04.008⟩
Contrasting sediment records of marine submersion events related to wave exposure, Southwest France
Juliette Baumann , Eric Chaumillon , J. Schneider , Frank Jorissen , Pierre-Guy Sauriau , Pierre Richard , J. Bonnin , Sabinne Schmidt
Sedimentary Geology, 2017, 353, pp.158 - 170. ⟨10.1016/j.sedgeo.2017.03.009⟩
Geographic patterns of biodiversity in European coastal marine benthos
Herman Hummel , Pim van Avesaath , Sander Wijnhoven , Loran Kleine-Schaars , Steven Degraer , Francis Kerckhof , Natalia Bojanic , Sanda Skejic , Olja Vidjak , Maria Rousou , Helen Orav-Kotta , Jonne Kotta , J. Jourde , Maria Luiza Pedrotti , Jean-Charles Leclerc , Nathalie Simon , Fabienne Rigaut-Jalabert , Guy Bachelet , Nicolas Lavesque , Christos Arvanitidis , Christina Pavloudi , Sarah Faulwetter , Tasman Crowe , Jennifer Coughlan , Lisandro Benedetti-Cecchi , Martina Dal Bello , Paolo Magni , Serena Como , Stefania Coppa , Anda Ikauniece , Tomas Ruginis , Emilia Jankowska , Jan Marcin Weslawski , Jan Warzocha , Sławomira Gromisz , Bartosz Witalis , Teresa Silva , Pedro Ribeiro , Valentina Kirienko Fernandes de Matos , Isabel Sousa-Pinto , Puri Veiga , Jesús Troncoso , Xabier Guinda , Jose Antonio Juanes de La Pena , Araceli Puente , Free Espinosa , Angel Perez-Ruzafa , Matt Frost , Caroline Louise Mcneill , Ohad Peleg , Gil Rilov
Journal of the Marine Biological Association of the UK, 2017, 97 (3), pp.507-523. ⟨10.1017/S0025315416001119⟩
Persistent benthic communities in the extreme dynamic intertidal mudflats of the Amazonian coast: an overview of the Tanaidacea (Crustacea, Peracarida)
H. Thanh Nguyen , C. Dupuy , J. Jourde , C. Lefrançois , P. Pascal , Alexandra Carpentier , Jérome Chevalier , P. Bocher
Marine Biodiversity Records, 2017, ⟨10.1007/s12526-017-0679-2⟩
Factors influencing prokaryotes in an intertidal mudflat and the resulting depth gradients
Céline Lavergne , Hélène Agogué , Aude Leynaert , Mélanie Raimonet , Rutger de Wit , Philippe Pineau , Martine Bréret , Nicolas Lachaussée , Christine Dupuy
Estuarine, Coastal and Shelf Science, 2017, 189, pp.74 - 83. ⟨10.1016/j.ecss.2017.03.008⟩
Strong linkage of polar cod (Boreogadus saida) to sea ice algae-produced carbon: Evidence from stomach content, fatty acid and stable isotope analyses
Doreen Kohlbach , Fokje L. Schaafsma , Martin Graeve , Benoit Lebreton , Benjamin Allen Lange , Carmen David , Martina Vortkamp , Hauke Flores
Progress in Oceanography, 2017, 152, pp.62 - 74. ⟨10.1016/j.pocean.2017.02.003⟩
A global threats overview for Numeniini populations: synthesising expert knowledge for a group of declining migratory birds
James Pearce-Higgins , Daniel J. Brown , David J. T. Douglas , José A. Alves , Mariagrazia Bellio , Pierrick Bocher , Graeme M. Buchanan , Rob P. Clay , Jesse Conklin , Nicola Crockford , Peter Dann , Jaanus Elts , Christian Friis , Richard A. Fuller , Jennifer A. Gill , Ken Gosbell , James A. Johnson , Rocio Marquez-Ferrando , José A. Masero , David S. Melville , Spike Millington , Clive Minton , Taej Mundkur , Erica Nol , Hannes Pehlak , Theunis Piersma , Frédéric Robin , Danny I. Rogers , Daniel R. Ruthrauff , Nathan R. Senner , Junid N. Shah , Rob D. Sheldon , Sergej A. Soloviev , Pavel S. Tomkovich , Yvonne I. Verkuil
Bird Conservation International, 2017, 27 (01), pp.6 - 34. ⟨10.1017/S0959270916000678⟩
How does a restored oyster reef develop? An assessment based on stable isotopes and community metrics
Ryan Rezek , Benoit Lebreton , E. Brendan Roark , Terence A. Palmer , Jennifer Beseres Pollack
Marine Biology, 2017, 164, pp.54. ⟨10.1007/s00227-017-3084-2⟩
Building a database for long-term monitoring of benthic macrofauna in the Pertuis-Charentais (2004-2014)
Anne Philippe , Christine Plumejeaud-Perreau , Jérôme Jourde , Philippe Pineau , Nicolas Lachaussée , Emmanuel Joyeux , Frédéric Corre , Philippe Delaporte , Pierrick Bocher
Biodiversity Data Journal, 2017, 5, ⟨10.3897/BDJ.5.e10288⟩
Microbial Diversity and Cyanobacterial Production in Dziani Dzaha Crater Lake, a Unique Tropical Thalassohaline Environment
Christophe Leboulanger , Hélène Agogué , Cécile Bernard , Marc Bouvy , Claire Carré , Maria Cellamare , Charlotte Duval , Eric Fouilland , Patrice Got , Laurent Intertaglia , Céline Lavergne , Emilie Le Floc'H , Cécile Roques , Gérard Sarazin
PLoS ONE, 2017, 12 (1), pp.e0168879. ⟨10.1371/journal.pone.0168879⟩
Cell-bound exopolysaccharides from an axenic culture of the intertidal mudflat Navicula phyllepta diatom affect biofilm formation by benthic bacteria
Ibtissem Doghri , Johann Lavaud , Alain Dufour , Alexis Bazire , Isabelle Lanneluc , Sophie Sablé
Journal of Applied Phycology, 2017, 29 (1), pp.165-177. ⟨10.1007/s10811-016-0943-z⟩
Regional and latitudinal patterns of soft-bottom macrobenthic invertebrates along French coasts: Results from the RESOMAR database
Régis K. Gallon , Nicolas Lavesque , Jacques Grall , Céline Labrune , Antoine Grémare , Guy Bachelet , Hugues Blanchet , Vincent M. P. Bouchet , Jean-Claude Dauvin , Nicolas Desroy , Franck Gentil , Laurent Guérin , Céline Houbin , Jérôme Jourde , Sandrine Laurand , Michel Le Duff , Vincent Le Garrec , Xavier De Montaudouin , Frédéric Olivier , Francis Orvain , Pierre-Guy Sauriau , Eric Thiébaut , Olivier Gauthier
Journal of Sea Research (JSR), 2017, 130, pp.96-106. ⟨10.1016/j.seares.2017.03.011⟩
Low Benthic Macrofauna Diversity in Dynamic, Tropical Tidal Mudflats: Migrating Banks on Guiana's Coast, South America
Jérôme Jourde , Christine Dupuy , Hien T Nguyen , David Mizrahi , Nyls de Pracontal , Pierrick Bocher
Estuaries and Coasts, 2017, ⟨10.1007/s12237-016-0205-y⟩

Chapitre d'ouvrage

Les interactions fer-soufre dans les phénomènes de biocorrosion.
Philippe Refait , Marc Jeannin , René Sabot , Sophie Sablé , Isabelle Lanneluc , Alexandre Romaine , Sophia Necib , Samuel Pineau
Interactions matériaux-microorganismes. Bétons et métaux plus résistants à la biodétérioration. , 2017
Biofilms en milieu marin. Exemple des vasières intertidales et des structures métalliques portuaires.
Sophie Sablé , Philippe Refait , René Sabot , Marc Jeannin , Ibtissem Doghri , Mickaël Langumier , Isabelle Lanneluc
Interactions matériaux-microorganismes. Bétons et métaux plus résistants à la biodétérioration, 2017
L'Homme et la Mer ; La faune des vasières
Pierre-Guy Sauriau
Perrotin Benoit. Baie de l'Aiguillon, Editions Hesse, pp.192, 2017, 978-2-35706-040-1


Liste des publications des chercheurs de l’équipe DYFEA par année de 2004 à 2016 :

2016

Ar Gall E., Le Duff M., Sauriau P.-G., De Casamajor M.-N., Gevaert F., Poisson E., Hacquebart P., Joncourt Y., Barillé A.-L., Buchet R., Bréret M., Miossec L., 2016. Implementation of a new index to assess intertidal seaweed communities as bioindicators for the European Water Framework Directory. Ecological Indicators 60, 162-173.

Bello, M.D., Leclerc, J.-C., Benedetti-Cecchi, L., Andrea De Lucia, G., Arvanitidis, C., Van Avesaath, P., Bachelet, G., Bojanic, N., Como, S., Coppa, S., Coughlan, J., Crowe, T., Degraer, S., Espinosa, F., Faulwetter, S., Frost, M., Guinda, X., Jankowska, E., Jourde, J., Juanes De La Pena, J.A., Kerckhof, F., Kotta, J., Lavesque, N., Magni, P., De Matos, V., Orav-Kotta, H., Pavloudi, C., Pedrotti, M.L., Peleg, O., Pérez-Ruzafa, A., Puente, A., Ribeiro, P., Rigaut-Jalabert, F., Rilov, G., Rousou, M., Rubal, M., Ruginis, T., Silva, T., Simon, N., Sousa-Pinto, I., Troncoso, J., Warzocha, J., Weslawski, J.M., Hummel, H., 2016. Consistent patterns of spatial variability between NE Atlantic and Mediterranean rocky shores. Journal of the Marine Biological Association of the United Kingdom, 1-9.

Bouvy, M., Got, P., Domaizon, I., Pagano, M., Leboulanger, C., Bouvier, C., Carré, C., Roques, C., Dupuy, C., 2016. Plankton communities in the five Iles Eparses (Western Indian Ocean) considered to be pristine ecosystems. Acta Oecologica 72, 9-20.

Catry, T., Lourenço, P.M., Lopes, R.J., Bocher, P., Carneiro, C., Alves, J.A., Delaporte, P., Bearhop, S., Piersma, T., Granadeiro, J.P., 2016. Use of stable isotope fingerprints to assign wintering origin and trace shorebird movements along the East Atlantic Flyway. Basic and Applied Ecology 17, 177-187.

David, V., Hartmann, H., Barnett, A., Bréret, M., Montanié, H., Orvain, F., Dupuy, C., 2016. Impact of biofilm resuspension on mesozooplankton in a shallow coastal ecosystem characterized by a bare intertidal mudflat. Journal of the Marine Biological Association of the United Kingdom 96, 1319-1329.

De La Vega, C., Lebreton, B., Siebert, U., Guillou, G., Das, K., Asmus, R., Asmus, H., 2016. Seasonal variation of harbor Seal’s diet from the wadden sea in relation to prey availability. PLoS ONE 11.

Dessier, A., Dupuy, C., Trancart, T., Audras, A., Bustamante, P., Gérard, C., 2016. Low diversity of helminth parasites in Sardina pilchardus and Engraulis encrasicolus (Clupeidae) from the Bay of Biscay. Marine and Freshwater Research 67, 1583-1588.

Doghri, I., Lavaud, J., Dufour, A., Bazire, A., Lanneluc, I., Sablé, S. 2016. Cell-bound exopolysaccharides from an axenic culture of the intertidal mudflat Navicula phyllepta diatom affect biofilm formation by benthic bacteria. Journal of Applied Phycology. DOI : 10.1007/s10811-016-0943-z

Dupuy, C., Pagano, M., Got, P., Domaizon, I., Chappuis, A., Marchessaux, G., Bouvy, M., 2016. Trophic relationships between metazooplankton communities and their plankton food sources in the Iles Eparses (Western Indian Ocean). Marine Environmental Research 116, 18-31.

Galand P. , Lucas S. , Fagervold S.K., Peru E., Pruski H.M., Vétion G., Dupuy C., Guizien K. 2016. Disturbance increases microbial community diversity and productivity in marine sediments. Frontiers in Microbiology 7.

Hummel, H., Van Avesaath, P., Wijnhoven, S., Kleine-Schaars, L., Degraer, S., Kerckhof, F., Bojanic, N., Skejic, S., Vidjak, O., Rousou, M., Orav-Kotta, H., Kotta, J., Jourde, J., Pedrotti, M.L., Leclerc, J.-C., Simon, N., Rigaut-Jalabert, F., Bachelet, G., Lavesque, N., Arvanitidis, C., Pavloudi, C., Faulwetter, S., Crowe, T., Coughlan, J., Benedetti-Cecchi, L., Dal Bello, M., Magni, P., Como, S., Coppa, S., Ikauniece, A., Ruginis, T., Jankowska, E., Weslawski, J.M., Warzocha, J., Gromisz, S., Witalis, B., Silva, T., Ribeiro, P., Fernandes De Matos, V.K., Sousa-Pinto, I., Veiga, P., Troncoso, J., Guinda, X., Juanes De La Pena, J.A., Puente, A., Espinosa, F., Pérez-Ruzafa, A., Frost, M., Mcneill, C.L., Peleg, O. and Rilov, G. 2016. Geographic patterns of biodiversity in European coastal marine benthos. Journal of the Marine Biological Association of the United Kingdom, 1–17.

Jauffrais,T., Jesus,B., Méléder,V., Turpin,V., Russo,A.D.A.P.G., Raim-bault,P., Martin-Jézéquel,V.,2016. Physiological and photophysiological responses of the benthic diatom Entomoneis paludosa (Bacillariophyceae) to dissolved inorganic and organic nitrogen in culture, Marine Biology,163,doi:10.1007/s00227-016-2888-9.

Jauffrais T., Geslin E, Briand F., Jesus B., Martin Jézéquel V.2016. Locomotion speed of a benthic foraminifer Ammonia tepida exposed to different nitrogen and carbon sources. Journal of Sea Research 118, 52-58.

Jeanbille, M., Gury, J., Duran, R., Tronczynski, J., Ghiglione, J.F., Agogué, H., Ben Said, O., Taib, N., Debroas, D., Garnier, C., Auguet, J.C., 2016. Chronic Polyaromatic Hydrocarbon (PAH) Contamination Is a Marginal Driver for Community Diversity and Prokaryotic Predicted Functioning in Coastal Sediments. Frontiers in Microbiology 7.

Jeanbille, M., Gury, J., Duran, R., Tronczynski, J., Agogué, H., Ben Saïd, O., Ghiglione, J.-F., Auguet, J.-C., 2016. Response of Core Microbial Consortia to Chronic Hydrocarbon Contaminations in Coastal Sediment Habitats. Frontiers in Microbiology 7.

Kotta, J., Orav-Kotta, H., Jänes, H., Hummel, H., Arvanitidis, C., Van Avesaath, P., Bachelet, G., Benedetti-Cecchi, L., Bojanić, N., Como, S., Coppa, S., Coughlan, J., Crowe, T., Dal Bello, M., Degraer, S., De La Pena, J.A.J., Fernandes De Matos, V.K., Espinosa, F., Faulwetter, S., Frost, M., Guinda, X., Jankowska, E., Jourde, J., Kerckhof, F., Lavesque, N., Leclerc, J.-C., Magni, P., Pavloudi, C., Pedrotti, M.L., Peleg, O., Pérez-Ruzafa, A., Puente, A., Ribeiro, P., Rilov, G., Rousou, M., Ruginis, T., Silva, T., Simon, N., Sousa-Pinto, I., Troncoso, J., Warzocha, J., Weslawski, J.M., 2016. Essence of the patterns of cover and richness of intertidal hard bottom communities : a pan-European study. Journal of the Marine Biological Association of the United Kingdom, 1-14.

Lavaud, J., Six, C., Campbell, D.A., 2016. Photosystem II repair in marine diatoms with contrasting photophysiologies. Photosynthesis Research 127, 189-199.

Le Garrec, V., Grall, J., Chevalier, C., Guyonnet, B., Jourde, J., Lavesque, N., Bonifácio, P. and Blake, J.A. , 2016. Chaetozone corona (Polychaeta, Cirratulidae) in the Bay of Biscay : a new alien species for the North-east Atlantic waters ?, Journal of the Marine Biological Association of the United Kingdom, 1–13.

Lebreton, B., Beseres Pollack, J., Blomberg, B., Palmer, T.A., Adams, L., Guillou, G., Montagna, P.A., 2016. Origin, composition and quality of suspended particulate organic matter in relation to freshwater inflow in a South Texas estuary. Estuarine, Coastal and Shelf Science 170, 70-82.

Lee, Y. J., Matrai, P. A., Friedrichs, M. A. M., Saba, V. S., Aumont, O., Babin, M., Buitenhuis, E. T., Chevallier, M., de Mora, L., Dessert, M., Dunne, J. P., Ellingsen, I., Feldman, D., Frouin, R., Gehlen, M., Gorgues, T., Ilyina, T., Jin, M., John, J. G., Lawrence, J., Manizza, M., Menkes, C. E., Perruche, C., Le Fouest, V., Popova, E., Romanou, A., Samuelsen, A., Schwinger, J., Séférian, R., Stock, C. A., Tjiputra, J., Bruno Tremblay, L., Ueyoshi, K., Vichi, M., Yool, A. and Zhang, J. 2016. Net primary productivity estimates and environmental variables in the Arctic Ocean : An assessment of coupled physical-biogeochemical models, J. Geophys. Res. Oceans, Accepted Author Manuscript. doi:10.1002/2016JC011993.

Linart, C., Feunteun, E., Miller, M.J., Aoyama, J., Mortillaro, J.M., Hubas, C., Kuroki, M., Watanabe, S., Dupuy, C., Carpentier, A., Otake, T., Tsukamoto, K., Meziane, T., 2016. Geographic variation in stable isotopic and fatty acid composition of anguilliform leptocephali and particulate organic matter in the South Pacific. Marine Ecology Progress Series 544, 225-241.

Paar, M., Voronkov, A., Hop, H., Brey, T., Bartsch, I., Schwanitz, M., Wiencke, C., Lebreton, B., Asmus, R., Asmus, H., 2016. Temporal shift in biomass and production of macrozoobenthos in the macroalgal belt at Hansneset, Kongsfjorden, after 15 years. Polar Biology. Polar Biology 39, 2065-2076.

Philippe, A.S., Pinaud, D., Cayatte, M.L., Goulevant, C., Lachaussée, N., Pineau, P., Karpytchev, M., Bocher, P., 2016. Influence of environmental gradients on the distribution of benthic resources available for shorebirds on intertidal mudflats of Yves Bay, France. Estuarine, Coastal and Shelf Science 174, 71-81.

Puente, A., Guinda, X., Juanes, J.A., Ramos, E., Echavarri-Erasun, B., De La Hoz, C.F., Degraer, S., Kerckhof, F., Bojanić, N., Rousou, M., Orav-Kotta, H., Kotta, J., Jourde, J., Pedrotti, M.L., Leclerc, J.-C., Simon, N., Bachelet, G., Lavesque, N., Arvanitidis, C., Pavloudi, C., Faulwetter, S., Crowe, T.P., Coughlan, J., Cecchi, L.B., Dal Bello, M., Magni, P., Como, S., Coppa, S., De Lucia, G.A., Rugins, T., Jankowska, E., Weslawski, J.M., Warzocha, J., Silva, T., Ribeiro, P., De Matos, V., Sousa-Pinto, I., Troncoso, J., Peleg, O., Rilov, G., Espinosa, F., Ruzafa, A.P., Frost, M., Hummel, H., Van Avesaath, P., 2016. The role of physical variables in biodiversity patterns of intertidal macroalgae along European coasts. Journal of the Marine Biological Association of the United Kingdom, 1-12.

Sow, M.M., Majdi, N., Muylaert, K., Tackx, M., Julien, F., Probst, J.L., Mialet, B., Sutra, C., Probst, A., Thébault, J.M., Kenarlikdjian, M., Gérino, M., 2016. Retention of nutrients, suspended particulate matter and phytoplankton in a pondage associated with a run-of-the-river type hydroelectric power plant. Ecohydrology 9, 229-237.

Spilmont, N., Hachet, A., Faasse, M.A., Jourde, J., Luczak, C., Seuront, L., Rolet, C., 2016. First records of Ptilohyale littoralis (Amphipoda : Hyalidae) and Boccardia proboscidea (Polychaeta : Spionidae) from the coast of the English Channel : habitat use and coexistence with other species. Marine Biodiversity 1–11.

Wagner, H., Jakob, T., Lavaud, J., Wilhelm, C., 2016. Photosystem II cycle activity and alternative electron transport in the diatom Phaeodactylum tricornutum under dynamic light conditions and nitrogen limitation. Photosynthesis Research, 128,151-161.

2015

Babin, M., Bélanger, S., Ellingsen, I., Forest, A., Le Fouest, V., Lacour, T., Ardyna, M., Slagstad, D., 2015. Estimation of primary production in the Arctic Ocean using ocean colour remote sensing and coupled physical-biological models : Strengths, limitations and how they compare. Progress in Oceanography 139, 197-220.

Badawy H., Brunellière J., Veryaskina M., Brotons G., Sablé S., Lanneluc I., Lambert K., Marmey P., Milsted A., Cutright T., Nourry A., Mouget J.L., Pasetto P., 2015. Assessing the antimicrobial activity of polyisoprene based surfaces. International Journal of Molecular Sciences 16, 4392-4415.

Barnett A., Méléder V., Blommaert L., Lepetit B., Gaudin P., Vyverman W., Sabbe K., Dupuy C., Lavaud J., 2015. Growth form defines physiological photoprotective capacity in intertidal benthic diatoms. ISME Journal 9, 32-45.

Ben Henda Y., Laamari M., Lanneluc I., Travers M.-A., Agogué H., Arnaudin I., Bridiau N., Maugard T., Piot J.-M., Sannier F., Bordenave-Juchereau S., 2015. Di and tripeptides from marine sources can target adipogenic process and contribute to decrease adipocyte number and functions. Journal of Functional Foods 17, 1-10.

Chaalali, A., Saint-Béat, B., Lassalle, G., Le Loc’h, F., Tecchio, S., Safi, G., Savenkoff, C., Lobry, J., Niquil, N., 2015. A new modeling approach to define marine ecosystems food-web status with uncertainty assessment. Progress in Oceanography 135, 37-47.

Chouvelon T., Violamer L., Dessier A., Bustamante P., Mornet F., Pignon-Mussaud C., Dupuy, C., 2015. Small pelagic fish feeding patterns in relation to food resource variability : an isotopic investigation for Sardina pilchardus and Engraulis encrasicolus from the Bay of Biscay (north-east Atlantic). Marine Biology 162, 15-37.

Dessier, A., Dupuy, C., Trancart, T., Audras, A., Bustamante, P., Gérard, C., 2015. Low diversity of helminth parasites in Sardina pilchardus and Engraulis encrasicolus (Clupeidae) from the Bay of Biscay. Marine and Freshwater Research 67, 1583-1588.

Doghri I., Rodrigues S., Bazire A., Dufour A., Akbar D., Sopena V., Sablé S., Lanneluc I., 2015. Marine bacteria from the French Atlantic coast displaying high forming-biofilm abilities and different biofilm 3D architectures. BMC Microbiology 15, 231.

Drumm D.T., Jourde J., Bocher P., 2015. A new species of the genus Monokalliapseudes (Crustacea : Tanaidacea : Kalliapseudidae) from French Guiana. Proceedings of the Biological Society of Washington 128, 86-97.

Dupuy, C., Nguyen Thanh, H., Mizrahi, D., Jourde, J., Bréret, M., Agogué, H., Beaugeard, L., Bocher, P., 2015. Structure and functional characteristics of the meiofauna community in highly unstable intertidal mudbanks in Suriname and French Guiana (North Atlantic coast of South America). Continental Shelf Research 110, 39-47.

Faure, D., Bonin, P., Duran, R.,(The Microbial Ecology EC2CO consortium Sablé S. ) 2015. Environmental microbiology as a mosaic of explored ecosystems and issues. Environ Sci Pollut Res 22, 13577-13598.

Feunteun E., Miller M.J., Carpentier A., Aoyama J., Dupuy C., Kuroki M., Pagano M., Réveillac E., Sellos D., Watanabe S., Tsukamoto K., Otake,T., 2015. Stable isotopic composition of anguilliform leptocephali and other food web components from west of the Mascarene Plateau. Progress in Oceanography 137, 69-83.

Ganthy F., Soissons L., Sauriau P.G., Verney R., Sottolichio A., 2015. Effects of short flexible seagrass Zostera noltei on flow, erosion and deposition processes determined using flume experiments. Sedimentology 62, 997-1023.

Germain N., Hartmann H.J., Fernández-Rivera Melo F.J., Reyes-Bonilla H., 2015. Ornamental reef fish fisheries : New indicators of sustainability and human development at a coastal community level. Ocean and Coastal Management 104, 136-149.

Guesnet, V., Lassalle, G., Chaalali, A., Kearney, K., Saint-Béat, B., Karimi, B., Grami, B., Tecchio, S., Niquil, N., Lobry, J., 2015. Incorporating food-web parameter uncertainty into Ecopath-derived ecological network indicators. Ecological Modelling 313, 29-40.

Hugoni M., Agogué H., Taib N., Domaizon I. Moné A., Galand P. E., Bronner G., Debroas D., Marie I., 2015. Temporal Dynamics of Active Prokaryotic Nitrifiers and Archaeal Communities from River to Sea. Microbial Ecology 70, 473-483.

Hugoni M., Domaizon I., Taib N., Biderre-Petit C., Agogué H., Galand P.E., Debroas D., Mary I., 2015. Temporal dynamics of active Archaea in oxygen-depleted zones of two deep lakes. Environmental Microbiology Reports 7, 321-329.

Hutchison J., Philipp D.P.,Claussen J.E. Aburto-Oropeza O., Carrasquilla-Henao M., Castellanos-Galindo G.A., Costa M.T., Daneshgar P.D., Hartmann H.J., Juanes F., Khan M.N., Knowles L., Knudsen E., Lee S.L., Murchie K.J., Tiedemann J., zu Ermgassen P., Spalding M. 2015. Building an expert-judgement based model of mangrove fisheries. In : Murchie K.J., Daneshgar P. P. (eds), Mangroves as Fish Habitat. American Fisheries Society. Bethesda, MD, USA : p. 17 – 42. ISBN-13 : 978-1-934874-42-4.

Jauffrais, T., Drouet, S., Turpin, V., Méléder, V., Jesus, B., Cognie, B., Raimbault, P., Cosson, R.P., Decottignies, P., Martin-Jézéquel, V., 2015. Growth and biochemical composition of a microphytobenthic diatom (Entomoneis paludosa) exposed to shorebird (Calidris alpina) droppings. Journal of Experimental Marine Biology and Ecology 469, 83-92.

Jourde, J., Sampaio, L., Barnich, R., Bonifácio, P., Labrune, C., Quintino, V., Sauriau, P.-G., 2015. Malmgrenia louiseae sp. nov., a new scale worm species (Polychaeta : Polynoidae) from southern Europe with a key to European Malmgrenia species. Journal of the Marine Biological Association of the United Kingdom 95, 947-952.

Juneau P., Barnett A., Méléder V., Dupuy C., Lavaud J., 2015. Combined effect of high light and high salinity on the regulation of photosynthesis in three diatom species belonging to the main growth forms of intertidal flat inhabiting microphytobenthos. Journal of Experimental Marine Biology and Ecology 463, 95-104.

Lanneluc I., Langumier M., Sabot R., Jeannin M., Refait P., Sablé S., 2015. On the bacterial communities associated with the corrosion product layer during the early stages of marine corrosion of carbon steel. International Biodeterioration and Biodegradation 99, 55-65.

Laviale, M., Barnett, A., Ezequiel, J., Lepetit, B., Frankenbach, S., Méléder, V., Serôdio, J., Lavaud, J., 2015. Response of intertidal benthic microalgal biofilms to a coupled light-temperature stress : Evidence for latitudinal adaptation along the Atlantic coast of Southern Europe. Environmental Microbiology, 17, 3662-3677

Le Fouest V., Manizza M., Tremblay B., and Babin M., 2015. Modelling the impact of riverine DON removal by marine bacterioplankton on primary production in the Arctic Ocean, Biogeosciences, 12, 3385-3402.

Le Fouest V., Chami M., Verney R., 2015. Analysis of riverine suspended particulate matter fluxes (Gulf of Lion, Mediterranean Sea) using a synergy of ocean color observations with a 3-D hydrodynamic sediment transport model, Journal of Geophysical Research C : Oceans, 120, 942–957.

Liu, D., Li, X., Emeis, K.C., Wang, Y., Richard, P., 2015. Distribution and sources of organic matter in surface sediments of Bohai Sea near the Yellow River Estuary, China. Estuarine, Coastal and Shelf Science 165, 128-136.

Martin-Jézéquel, V., Calu, G., Candela, L., Amzil, Z., Jauffrais, T., Séchet, V., Weigel, P., 2015. Effects of organic and inorganic nitrogen on the growth and production of domoic acid by Pseudo-nitzschia multiseries and P. australis (Bacillariophyceae) in culture. Marine Drugs 13, 7055-7086.

Masbou, J., Point, D., Guillou, G., Sonke, J.E., Lebreton, B., Richard, P., 2015. Carbon Stable Isotope Analysis of Methylmercury Toxin in Biological Materials by Gas Chromatography Isotope Ratio Mass Spectrometry. Analytical Chemistry 87, 11732-11738.

Masbou,J., Point,D., Sonke,J.E., Frappart,F., Perrot, V., Amouroux,D., Richard,P., Becker,P.R., 2015. Hg stable isotope time trend in ringed sealsregisters decreasing sea ice cover in the Alaskan Arctic,Environmental Science and Technology,49,8977-8985.

Masclaux, H., Tortajada, S., Philippine, O., Robin, F.X., Dupuy, C., 2015. Planktonic food web structure and dynamic in freshwater marshes after a lock closing in early spring. Aquatic Sciences 77, 115-128.

Montanié, H., De Crignis, M.G., Lavaud, J., 2015. Viral impact on prokaryotic and microalgal activities in the microphytobenthic biofilm of an intertidal mudflat (French Atlantic coast). Frontiers in Microbiology 6, 1214.

Nguetseng R., Fliedner A., Knopf B., Lebreton B., Quack M., Rüdel H., 2015. Retrospective monitoring of mercury in fish from selected European freshwater and estuary sites. Chemosphere 134, 427-434.

Paar, M., Voronkov, A., Hop, H., Brey, T., Bartsch, I., Schwanitz, M., Wiencke, C., Lebreton, B., Asmus, R., Asmus, H., 2015. Temporal shift in biomass and production of macrozoobenthos in the macroalgal belt at Hansneset, Kongsfjorden, after 15 years. Polar Biology.

Robin, F., Meunier, F., Corre, F., Joyeux, E., Cayatte, M.-L., Delaporte, P., Lemesle, J.-C., Pineau, P., Bocher, P., 2015. Site and prey selection by wintering Black-tailed Godwit Limosa limosa islandica feeding on seagrass beds and bare mudflats on the central Atlantic coast of France. Revue d’Ecologie (Terre et Vie) 70, 134-147.

Saint-Béat, B., Baird, D., Asmus, H., Asmus, R., Bacher, C., Pacella, S.R., Johnson, G.A., David, V., Vézina, A.F., Niquil, N., 2015. Trophic networks : How do theories link ecosystem structure and functioning to stability properties ? A review. Ecological Indicators 52, 458-471.

Sardenne, F., Ménard, F., Degroote, M., Fouché, E., Guillou, G., Lebreton, B., Hollanda, S.J., Bodin, N., 2015. Methods of lipid-normalization for multi-tissue stable isotope analyses in tropical tuna. Rapid Communications in Mass Spectrometry 29, 1253-1267.

Yang A., Zhang X., Agogué H., Dupuy C., Gong J., 2015. Contrasting spatiotemporal patterns and environmental drivers of diversity and community structure of ammonia oxidizers, denitrifiers, and anammox bacteria in sediments of estuarine tidal flats. Annals of Microbiology 65, 879-890

2014

Agogué H., Mallet C., Orvain F., De Crignis M., Mornet F., Dupuy C., 2014. Bacterial dynamics in a microphytobenthic biofilm : A tidal mesocosm approach. Journal of Sea Research 92, 36-45.

Barros F., Blanchet H., Hammerstrom K., Sauriau P.G., Oliver J., 2014. A framework for investigating general patterns of benthic β-diversity along estuaries. Estuarine, Coastal and Shelf Science 149, 223-231.

Blanchet H., Gouillieux B., Alizier S., Amouroux J.M., Bachelet G., Barillé A.L., Dauvin J.C., de Montaudouin X., Derolez V., Desroy N., Grall J., Grémare A., Hacquebart P., Jourde J., Labrune C., Lavesque N., Meirland A., Nebout T., Olivier F., Pelaprat C., Ruellet T., Sauriau P.G., Thorin S., 2014. Multiscale patterns in the diversity and organization of benthic intertidal fauna among French Atlantic estuaries. Journal of Sea Research 90, 95-110.

Bocher P., Robin F., Kojadinovic J., Delaporte P., Rousseau P., Dupuy C., Bustamante P., 2014. Trophic resource partitioning within a shorebird community feeding on intertidal mudflat habitats. Journal of Sea Research 92,115-124.

Carpentier A., Como S., Dupuy C., Lefrançois C., Feunteun E., 2014. Feeding ecology of Liza spp. in a tidal flat : Evidence of the importance of primary production (biofilm) and associated meiofauna. Journal of Sea Research 92, 86-91.

Chouvelon T., Chappuis A., Bustamante P., Lefebvre S., Mornet F., Guillou G., Violamer L., Dupuy C., 2014. Trophic ecology of European sardine Sardina pilchardus and European anchovy Engraulis encrasicolus in the Bay of Biscay (north-east Atlantic) inferred from δ13C and δ15N values of fish and identified mesozooplanktonic organisms. Journal of Sea Research 85, 277-291.

Como S., Lefrancois C., Maggi E., Antognarelli F., Dupuy C., 2014. Behavioral responses of juvenile golden gray mullet Liza aurata to changes in coastal temperatures and consequences for benthic food resources. Journal of Sea Research 92, 66-73.

Dubois S., Blanchet H., Garcia A., Massé M., Galois R., Grémare A., Charlier K., Guillou G., Richard P., Savoye N., 2014. Trophic resource use by macrozoobenthic primary consumers within a semi-enclosed coastal ecosystem : Stable isotope and fatty acid assessment. Journal of Sea Research 88, 87-99.

Dupuy C., Mallet C., Guizien K., Montanié H., Bréret M., Mornet F., Fontaine C., Nérot C., Orvain F., 2014. Sequential resuspension of biofilm components (viruses, prokaryotes and protists) as measured by erodimetry experiments in the Brouage mudflat (French Atlantic coast). Journal of Sea Research 92, 56-65.

Fargier L., Hartmann H.J., Molina-Ureña H., 2014. Marine Areas of Responsible Fishing : a path toward small-scale fisheries co-management in Costa Rica ? Perspectives from Golfo Dulce. in : Amezcua-Martínez F (Ed) "Fisheries Management of Mexican and Central American Estuaries”, Estuaries of the World, Springer Verlag, Dordrecht 2014 : p. 155-179

Giovagnetti V., Flori S., Tramontano F., Lavaud J., Brunet C., 2014. The velocity of light intensity increase modulates the photoprotective response in coastal diatoms. PLoS ONE 9.

Graba M., Sauvage S., Majdi N., Mialet B., Moulin F.Y., Urrea G., Buffan-Dubau E., Tackx M., Sabater S., Sanchez-Pérez J.M., 2014. Modelling epilithic biofilms combining hydrodynamics, invertebrate grazing and algal traits. Freshwater Biology. DOI : 10.1111/fwb.12341

Guizien K., Dupuy C., Ory P., Montanié H., Hartmann H., Chatelain M., Karpytchev M., 2014. Microorganism dynamics during a rising tide : Disentangling effects of resuspension and mixing with offshore waters above an intertidal mudflat. Journal of Marine Systems 129, 178-188.

Hlaili, A.S., Niquil, N., Legendre, L., 2014. Planktonic food webs revisited : Reanalysis of results from the linear inverse approach. Progress in Oceanography 120, 216-229.

Korsman J.C., Schipper A.M., De Hoop L., Mialet B., Maris T., Tackx M.L.M., Hendriks A.J., 2014. Modeling the impacts of multiple environmental stress factors on estuarine copepod populations. Environmental Science and Technology 48, 5709-5717.

Lassalle G., Bourdaud P., Saint-Béat B., Rochette S., Niquil N., 2014. A toolbox to evaluate data reliability for whole-ecosystem models : Application on the Bay of Biscay continental shelf food-web model. Ecological Modelling 285, 13-21.

Lassalle G., Chouvelon T., Bustamante P., Niquil N., 2014. An assessment of the trophic structure of the Bay of Biscay continental shelf food web : Comparing estimates derived from an ecosystem model and isotopic data. Progress in Oceanography 120, 205-215.

Lassalle G., Nelva Pasqual J.-S., Boët P., Rochet M.-J., Trenkel V.M., Niquil N., 2014. Combining quantitative and qualitative models to identify functional groups for monitoring changes in the Bay of Biscay continental shelf exploited foodweb. ICES Journal of Marine Science 71, 105-117.

Lavergne C., Beaugeard L., Dupuy C., Courties C., Agogué H., 2014. An efficient and rapid method for the enumeration of heterotrophic prokaryotes in coastal sediments by flow cytometry. Journal of Microbiological Methods 105, 31-38.

Lucia M., Bocher P., Chambosse M., Delaporte P., Bustamante P., 2014. Trace element accumulation in relation to trophic niches of shorebirds using intertidal mudflats. Journal of Sea Research 92, 134-143.

Mallet C., Agogué H., Bonnemoy F., Guizien K., Orvain F., Dupuy C., 2014. Structures of benthic prokaryotic communities and their hydrolytic enzyme activities resuspended from samples of intertidal mudflats : An experimental approach. Journal of Sea Research 92, 158-169.

Montanié H., Ory P., Orvain F., Delmas D., Dupuy C., Hartmann H.J. 2014. Microbial interactions in marine water amended by eroded benthic biofilm : A case study from an intertidal mudflat. Journal of Sea Research 92, 74-85.

Orvain F., De Crignis M., Guizien K., Lefebvre S., Mallet C., Takahashi E., Dupuy C., 2014. Tidal and seasonal effects on the short-term temporal patterns of bacteria, microphytobenthos and exopolymers in natural intertidal biofilms (Brouage, France). Journal of Sea Research 92, 6-18.

Orvain F., Guizien K., Lefebvre S., Bréret M., Dupuy C., 2014. Relevance of macrozoobenthic grazers to understand the dynamic behaviour of sediment erodibility and microphytobenthos resuspension in sunny summer conditions. Journal of Sea Research 92, 46-55.

Pierre G., Zhao J.-M., Orvain F., Dupuy C., Klein G.L., Graber M., Maugard T., 2014. Seasonal dynamics of extracellular polymeric substances (EPS) in surface sediments of a diatom-dominated intertidal mudflat (Marennes–Oléron, France). Journal of Sea Research 92, 26-35.

Quaintenne G., Bocher P., Ponsero A., Caillot E., Feunteun E., 2014. Contrasting Benthos Communities and Prey Selection by Red Knot Calidris canutus in Three Nearby Bays on the Channel Coast. Ardea 101, 87-98.

Rasconi, S., Grami, B., Niquil, N., Jobard, M., Sime-Ngando, T., 2014. Parasitic chytrids sustain zooplankton growth during inedible algal bloom. Frontiers in Microbiology 5.

Saint-Béat B., Dupuy C., Agogué H., Carpentier A., Chalumeau J., Como S., David V., De Crignis M., Duchêne J.C., Fontaine C., Feunteun E., Guizien K., Hartmann H., Lavaud J., Lefebvre S., Lefrançois C., Mallet C., Montanié H., Mouget J.L., Orvain F., Ory P., Pascal P.Y., Radenac G., Richard P., Vézina A.F., Niquil N., 2014. How does the resuspension of the biofilm alter the functioning of the benthos-pelagos coupled food web of a bare mudflat in Marennes-Oléron Bay (NE Atlantic) ? Journal of Sea Research 92, 144-157.

Sokołowski, A., Szczepańska, A., Richard, P., Kedra, M., Wołowicz, M., Wesławski, J.M., 2014. Trophic structure of the macrobenthic community of Hornsund, Spitsbergen, based on the determination of stable carbon and nitrogen isotopic signatures. Polar Biology 37, 1247-1260.

Tambadou F., Lanneluc I., Sablé S., Klein G.L., Doghri I., Sopéna V., Didelot S., Barthélémy C., Thiéry V., Chevrot R., 2014. Novel nonribosomal peptide synthetase (NRPS) genes sequenced from intertidal mudflat bacteria. FEMS Microbiology Letters 357, 123-130.

Zhang X., Agogué H., Dupuy C., Gong J., 2014. Relative Abundance of Ammonia Oxidizers, Denitrifiers, and Anammox Bacteria in Sediments of Hypernutrified Estuarine Tidal Flats and in Relation to Environmental Conditions. CLEAN - Soil, Air, Water, 2 (6), 815-823.

2013

Batifoulier F., Lazure P., Velo-Suarez L., Maurer D., Bonneton P., Charria G., Dupuy C., Gentien P., 2013. Distribution of Dinophysis species in the Bay of Biscay and possible transport pathways to Arcachon Bay. Journal of Marine Systems 109-110, S273-S283.

Bocher P., Robin F., Deceuninck B., Caillot E., 2013. Distribution, phenology and long-term population trends in Blacktailed Godwits Limosa limosa wintering in coastal France. Acta Ornithologica 48, 141-150.

Bocher P., Robin F., Meunier F., Delaporte P., Simon-Bouhet B., 2013. Origins and Age Structure of Black-Tailed Godwits Limosa limosa on the Central Atlantic Coast of France. Ardeola 60, 225-243.

Chaigne, A., Authier, M., Richard, P., Cherel, Y., Guinet, C., 2013. Shift in foraging grounds and diet broadening during ontogeny in southern elephant seals from Kerguelen Islands. Marine Biology 160, 977-986.

Cherel, Y., Jaeger, A., Alderman, R., Jaquemet, S., Richard, P., Wanless, R.M., Phillips, R.A., Thompson, D.R., 2013. A comprehensive isotopic investigation of habitat preferences in nonbreeding albatrosses from the Southern Ocean. Ecography 36, 277-286.

Corenblit, D.J.-F., Julien, F., Steiger, J., Darrozes, J., Mialet, B., 2013. High shell deposition of the invasive clam Corbicula fluminea (Müller, 1774) (Bivalvia : Corbiculidae) on alluvial bars : exploratory investigations and biogeomorphological research perspectives. Geomorphologie -Paris- 19, 153-164.

Hugoni M., Taib N., Debroas D., Domaizon I., Dufournel I.J., Bronner G., Salter I., Agogué H., Mary I., Galand P.E., 2013. Structure of the rare archaeal biosphere and seasonal dynamics of active ecotypes in surface coastal waters. Proceedings of the National Academy of Sciences of the United States of America 110, 6004-6009.

Jassey V.E.J., Meyer C., Dupuy C., Bernard N., Mitchell E.A.D., Toussaint M.L., Metian M., Chatelain A.P., Gilbert D., 2013. To What Extent Do Food Preferences Explain the Trophic Position of Heterotrophic and Mixotrophic Microbial Consumers in a Sphagnum Peatland ? Microbial Ecology 66, 571-580.

Jourde, J., Sauriau, P.-G., Guenneteau, S., Caillot, E., 2013. First record of Grandidierella japonica Stephensen, 1938 (Amphipoda : Aoridae) from mainland Europe. BioInvasions Record 2, 51-55.

Kientz B., Agogué H., Lavergne C., Marié P., Rosenfeld E., 2013. Isolation and distribution of iridescent Cellulophaga and other iridescent marine bacteria from the Charente-Maritime coast, French Atlantic. Systematic and Applied Microbiology 36, 244-251.

Lassalle G., Lobry J., Le Loc’h F., Mackinson S., Sanchez F., Tomczak M.T., Niquil,N., 2013. Ecosystem status and functioning : Searching for rules of thumb using an intersite comparison of food-web models of Northeast Atlantic continental shelves. ICES Journal of Marine Science 70, 135-149.

Lavaud J., Lepetit B., 2013. An explanation for the inter-species variability of the photoprotective non-photochemical chlorophyll fluorescence quenching in diatoms. Biochimica et Biophysica Acta - Bioenergetics 1827, 294-302.

Le Fouest, V., Babin, M., Tremblay, J.E., 2013. The fate of riverine nutrients on Arctic shelves. Biogeosciences 10, 3661-3677.

Le Fouest, V., Zakardjian, B., Xie, H., Raimbault, P., Joux, F., Babin, M., 2013. Modeling plankton ecosystem functioning and nitrogen fluxes in the oligotrophic waters of the Beaufort Sea, Arctic Ocean : A focus on light-driven processes. Biogeosciences 10, 4785-4800.

Lebreton B., Richard P., Guillou G., Blanchard G.F., 2013. Trophic shift in young-of-the-year Mugilidae during salt-marsh colonization. Journal of Fish Biology 82, 1297-1307.

Legendre L., Niquil N., 2013. Large-scale regional comparisons of ecosystem processes : Methods and approaches. Journal of Marine Systems 109-110, 4-21.

Lepetit B., Sturm S., Rogato A., Gruber A., Sachse M., Falciatore A., Kroth P.G., Lavaud J., 2013. High light acclimation in the secondary plastids containing diatom Phaeodactylum tricornutum is triggered by the redox state of the plastoquinone pool. Plant Physiology 161, 853-865.

Marquise N., Harford P.J., Chevallier F., Roisnel T., Dorcet,V., Gagez A.L., Sablé S., Picot L., Thiéry V., Wheatley A.E.H., Gros P.C., Mongin F., 2013. Synthesis of azafluorenones and related compounds using deprotocupration-aroylation followed by intramolecular direct arylation. Tetrahedron 69, 10123-10133.

Méléder V., Laviale M., Jesus B., Mouget J.L., Lavaud J., Kazemipour F., Launeau P., Barillé L., 2013. In vivo estimation of pigment composition and optical absorption cross-section by spectroradiometry in four aquatic photosynthetic micro-organisms. Journal of Photochemistry and Photobiology B : Biology 129, 115-124.

Mialet B., Majdi N., Tackx M., Azémar F., Buffan-Dubau E., 2013. Selective Feeding of Bdelloid Rotifers in River Biofilms. PLoS ONE 8, e75352.

Pacella S.R., Lebreton B., Richard P., Phillips D., DeWitt T.H., Niquil N., 2013. Incorporation of diet information derived from Bayesian stable isotope mixing models into mass-balanced marine ecosystem models : A case study from the Marennes-Oléron Estuary, France. Ecological Modelling 267, 127-137.

Raimonet, M., Guillou, G., Mornet, F., Richard, P., 2013. Macroalgae δ15N values in well-mixed estuaries : Indicator of anthropogenic nitrogen input or macroalgae metabolism ? Estuarine, Coastal and Shelf Science 119, 126-138.

Robin F., Piersma T., Meunier F., Bocher P., 2013. Expansion into an herbivorous niche by a customary carnivore : Black -tailed god wits feeding on rhizomes of zostera at a newly established wintering site. Condor 115, 340-347.

Rombouts I., Beaugrand G., Fizzala X., Gaill F., Greenstreet S.P.R., Lamare S., Le Loc’H F., McQuatters-Gollop A., Mialet B., Niquil,N., Percelay J., Renaud F., Rossberg A.G., Féral J.P., 2013. Food web indicators under the Marine Strategy Framework Directive : From complexity to simplicity ? Ecological Indicators 29, 246-254.

Saint-Béat B., Dupuy C., Bocher P., Chalumeau J., De Crignis M., Fontaine C., Guizien K., Lavaud J., Lefebvre S., Montanié H., Mouget J.L., Orvain F., Pascal P.Y., Quaintenne G., Radenac G., Richard P., Robin F., Vézina A.F., Niquil N., 2013. Key Features of Intertidal Food Webs That Support Migratory Shorebirds. PLoS ONE 8.

Saint-Béat B., Vézina A.F., Asmus R., Asmus H., Niquil N., 2013. The mean function provides robustness to linear inverse modelling flow estimation in food webs : A comparison of functions derived from statistics and ecological theories. Ecological Modelling 258, 53-64.

Serôdio J., Ezequiel J., Frommlet J., Laviale M., Lavaud J., 2013. A method for the rapid generation of nonsequential light-response curves of chlorophyll fluorescence. Plant Physiology 163, 1089-1102.

Sturm S., Engelken J., Gruber A., Vugrinec S., G Kroth P., Adamska I., Lavaud J., 2013. A novel type of light-harvesting antenna protein of red algal origin in algae with secondary plastids. BMC Evolutionary Biology 13.

Tekwani N., Majdi N., Mialet B., Tornés E., Urrea-Clos G., Buffan-Dubau E., Sabater S., Tackx M., 2013. Contribution of epilithic diatoms to benthic-pelagic coupling in a temperate river. Aquatic Microbial Ecology 69, 47-57.

Wang, Y., Liu, D., Richard, P., Li, X., 2013. A geochemical record of environmental changes in sediments from Sishili Bay, northern Yellow Sea, China : Anthropogenic influence on organic matter sources and composition over the last 100years. Marine Pollution Bulletin 77, 227-236

2012

Asmus, R., Asmus, H., Baird, D., Niquil, N., 2012. Preface Special Issue Estuarine systems : changes and challenges. Estuarine, Coastal and Shelf Science 108, 1-2.

Authier, M., Dragon, A.C., Richard, P., Cherel, Y., Guinet, C., 2012. O’ mother where wert thou ? Maternal strategies in the southern elephant seal : a stable isotope investigation. Proceedings. Biological sciences / The Royal Society 279, 2681-2690.

Bocher, P., Quaintenne, G., Delaporte, P., Goulevant, C., Deceuninck, B., Caillot, E., 2012. Distribution, phenology and long term trends of Red Knots Calidris canutus in France. Wader Study Group Bulletin 119, 17-25.

Bocher, P., Quaintenne, G., Robin, F., Doumeret, A., Delaporte, P., 2012. Origins and age structure of Red Knot Calidris canutus staging and wintering on the Atlantic coast of France. Journal of Ornithology 153, 103-114.

Bouvy, M., Combe, M., Bettarel, Y., Dupuy, C., Rochelle-Newall, E., Charpy, L., 2012. Uncoupled viral and bacterial distributions in coral reef waters of Tuamotu Archipelago (French Polynesia). Marine Pollution Bulletin 65, 506-515.

Bouvy, M., Dupuy, C., Pagano, M., Barani, A., Charpy, L., 2012. Do human activities affect the picoplankton structure of the Ahe atoll lagoon (Tuamotu Archipelago, French Polynesia) ? Marine Pollution Bulletin 65, 516-524.

Ceia, F.R., Phillips, R.A., Ramos, J.A., Cherel, Y., Vieira, R.P., Richard, P., Xavier, J.C., 2012. Short- and long-term consistency in the foraging niche of wandering albatrosses. Marine Biology 159, 1581-1591.

Coz, R., Ouisse, V., Artero, C., Carpentier, A., Crave, A., Feunteun, E., Olivier, J.-M., Perrin, B., Ysnel, F., 2012. Development of a new standardised method for sustainable monitoring of the vulnerable pink sea fan Eunicella verrucosa. Marine Biology 159, 1375-1388.

David, V., Ryckaert, M., Karpytchev, M., Bacher, C., Arnaudeau, V., Vidal, N., Maurer, D., Niquil, N., 2012. Spatial and long-term changes in the functional and structural phytoplankton communities along the French Atlantic coast. Estuarine, Coastal and Shelf Science 108, 37-51.

Domaizon, I., Lepère, C., Debroas, D., Bouvy, M., Ghiglione, J.F., Jacquet, S., Bettarel, Y., Bouvier, C., Torréton, J.P., Vidussi, F., Mostajir, B., Kirkham, A., Lefloch, E., Fouilland, E., Montanié, H., Bouvier, T., 2012. Short-term responses of unicellular planktonic eukaryotes to increases in temperature and UVB radiation. BMC Microbiology 12, 202.

Fournier, J., Dupuy, C., Bouvy, M., Couraudon-Réale, M., Charpy, L., Pouvreau, S., Le Moullac, G., Le Pennec, M., Cochard, J.C., 2012. Pearl oysters Pinctada margaritifera grazing on natural plankton in Ahe atoll lagoon (Tuamotu archipelago, French Polynesia). Marine Pollution Bulletin 65, 490-499.

Jassey, V.E.J., Shimano, S., Dupuy, C., Toussaint, M.L., Gilbert, D., 2012. Characterizing the Feeding Habits of the Testate Amoebae Hyalosphenia papilio and Nebela tincta along a Narrow " Fen-Bog" Gradient Using Digestive Vacuole Content and 13C and 15N Isotopic Analyses. Protist 163, 451-464.

Jourde, J., Alizier, S., Dancie, C., Dauvin, J.C., Desroy, N., Dubut, S., Gentil, F., Grall, J., Hanin, C., Lanshere, J., Thiébaut, E., 2012. First and repeated records of the tropical-temperate crab Asthenognathus atlanticus Monod, 1932 (Decapoda : Brachyura) in the eastern part of the bay of seine (eastern english channel, France). Cahiers de Biologie Marine 53, 525-532.

Kernaléguen, L., Cazelles, B., Arnould, J.P.Y., Richard, P., Guinet, C., Cherel, Y., 2012. Long-term species, sexual and individual variations in foraging strategies of fur seals revealed by stable isotopes in whiskers. PLoS ONE 7.

Lassalle, G., Gascuel, D., Le Loc’h, F., Lobry, J., Pierce, G.J., Ridoux, V., Santos, M.B., Spitz, J., Niquil, N., 2012. An ecosystem approach for the assessment of fisheries impacts on marine top predators : the Bay of Biscay case study. ICES Journal of Marine Science : Journal du Conseil 69, 925-938.

Lavaud, J., Materna, A.C., Sturm, S., Vugrinec, S., Kroth, P.G., 2012. Silencing of the violaxanthin de-epoxidase gene in the diatom Phaeodactylum tricornutum reduces diatoxanthin synthesis and non-photochemical quenching. PLoS ONE 7.

Lebreton, B., Richard, P., Galois, R., Radenac, G., Brahmia, A., Colli, G., Grouazel, M., André, C., Guillou, G., Blanchard, G.F., 2012. Food sources used by sediment meiofauna in an intertidal Zostera noltii seagrass bed : A seasonal stable isotope study. Marine Biology 159, 1537-1550.

Lucia, M., Bocher, P., Cosson, R.P., Churlaud, C., Bustamante, P., 2012. Evidence of species-specific detoxification processes for trace elements in shorebirds. Ecotoxicology 21, 2349-2362.

Lucia, M., Bocher, P., Cosson, R.P., Churlaud, C., Robin, F., Bustamante, P., 2012. Insight on trace element detoxification in the Black-tailed Godwit (Limosa limosa) through genetic, enzymatic and metallothionein analyses. Science of the Total Environment 423, 73-83.

Majdi, N., Mialet, B., Boyer, S., Tackx, M., Leflaive, J., Boulêtreau, S., Ten-Hage, L., Julien, F., Fernandez, R., Buffan-Dubau, E., 2012. The relationship between epilithic biofilm stability and its associated meiofauna under two patterns of flood disturbance. Freshwater Science 31, 38-50.

Marrou, L., Marencic, H., Niquil, N., 2012. Preface B. From Venice to Wadden : A brief review of " transitional water systems" as World Heritage Sites. Estuarine, Coastal and Shelf Science 108, 3-6.

Meissner, A.M., MacLeod, C.D., Richard, P., Ridoux, V., Pierce, G., 2012. Feeding ecology of striped dolphins, Stenella coeruleoalba, in the north-western Mediterranean Sea based on stable isotope analyses. Journal of the Marine Biological Association of the United Kingdom 92, 1677-1687.

Modéran, J., David, V., Bouvais, P., Richard, P., Fichet, D., 2012. Organic matter exploitation in a highly turbid environment : Planktonic food web in the Charente estuary, France. Estuarine, Coastal and Shelf Science 98, 126-137.

Niquil, N., Chaumillon, E., Johnson, G.A., Bertin, X., Grami, B., David, V., Bacher, C., Asmus, H., Baird, D., Asmus, R., 2012. The effect of physical drivers on ecosystem indices derived from ecological network analysis : Comparison across estuarine ecosystems. Estuarine, Coastal and Shelf Science 108, 132-143.

Orvain, F., Le Hir, P., Sauriau, P.G., Lefebvre, S., 2012. Modelling the effects of macrofauna on sediment transport and bed elevation : Application over a cross-shore mudflat profile and model validation. Estuarine, Coastal and Shelf Science 108, 64-75.

Pagano, M., Sagarra, P.-B., Champalbert, G., Bouvy, M., Dupuy, C., Thomas, Y., Charpy, L., 2012. Metazooplankton communities in the Ahe atoll lagoon (Tuamotu Archipelago, French Polynesia) : Spatiotemporal variations and trophic relationships. Marine Pollution Bulletin 65, 538-548.

Pierre, G., Graber, M., Rafiliposon, B.A., Dupuy, C., Orvain, F., de Crignis, M., Maugard, T., 2012. Biochemical Composition and Changes of Extracellular Polysaccharides (ECPS) Produced during Microphytobenthic Biofilm Development (Marennes-Oléron, France). Microbial Ecology 63, 157-169.

Ramdine, G., Fichet, D., Louis, M., Lemoine, S., 2012. Polycyclic aromatic hydrocarbons (PAHs) in surface sediment and oysters (Crassostrea rhizophorae) from mangrove of Guadeloupe : Levels, bioavailability, and effects. Ecotoxicology and Environmental Safety 79, 80-89.

Rasconi, S., Niquil, N., Sime-Ngando, T., 2012. Phytoplankton chytridiomycosis : Community structure and infectivity of fungal parasites in aquatic ecosystems. Environmental Microbiology 14, 2151-2170.

Rzeznik-Orignac, J., Fichet, D., 2012. Experimental estimation of assimilation rates of meiofauna feeding on 14C-labelled benthic diatoms. Journal of Experimental Marine Biology and Ecology 432-433, 179-185.

Serôdio, J., Ezequiel, J., Barnett, A., Mouget, J., Méléder, V., Laviale, M., Lavaud, J., 2012. Efficiency of photoprotection in microphytobenthos : role of vertical migration and the xanthophyll cycle against photoinhibition. Aquatic Microbial Ecology 67, 161-175.

Sokołowski, A., Wołowicz, M., Asmus, H., Asmus, R., Carlier, A., Gasiunaité, Z., Grémare, A., Hummel, H., Lesutiené, J., Razinkovas, A., Renaud, P.E., Richard, P., Kedra, M., Lebreton, B., 2012. Is benthic food web structure related to diversity of marine macrobenthic communities ? Estuarine, Coastal and Shelf Science 108, 76-86.

Tortajada, S., Niquil, N., Blanchet, H., Grami, B., Montanié, H., David, V., Glé, C., Saint-Béat, B., Johnson, G.A., Marquis, E., Del Amo, Y., Dubois, S., Vincent, D., Dupuy, C., Jude, F., Hartmann, H.J., Sautour, B., 2012. Network analysis of the planktonic food web during the spring bloom in a semi enclosed lagoon (Arcachon, SW France). Acta Oecologica 40, 40-50.

Witkowski, A., Sullivan, M.J., Bogaczewicz-Adamcza, B., Bak, M., Rhiel, E., Ribeiro, L., Richard, P., 2012. Morphology and distribution of a little known but widespread diatom (Bacillariophyceae), Navicula spartinetensis Sullivan et Reimer. Diatom Research 27, 43-51.

2011

Agogué H, Lamy D, Neal PR, Sogin ML, Herndl GJ (2011) Water mass−specificity of bacterial communities in the North Atlantic revealed by massively parallel sequencing. Molecular ecology 20 : 258−274

Baeta, A., Niquil, N., Marques, J.C., Patrício, J., 2011. Modelling the effects of eutrophication, mitigation measures and an extreme flood event on estuarine benthic food webs. Ecological Modelling 222, 1209-1221.

Bouvy M, Jacquet S, Domaizon I, Bettarel Y, Bouvier C, Montanié H, Mostajir B, Sime Ngando T, Torreton JP, Vidussi F, Bouvier T (2011) Trophic interactions between viruses, bacteria and nanoflagellates under various nutrient conditions and simulated climate change. Environmental Microbiology 13 : 1842-1857

Bukaveckas, P.A., Barry, L.E., Beckwith, M.J., David, V., Lederer, B., 2011. Factors Determining the Location of the Chlorophyll Maximum and the Fate of Algal Production within the Tidal Freshwater James River. Estuaries and Coasts 34, 569-582.

Dupuy C, Talarmin A, Hartmann HJ, Delmas D, Courties C, Marquis E (2011) Community structure and grazing of the nano-microzooplankton on the continental shelf of the Bay of Biscay. Estuarine Coastal and Shelf Science 95 : 1-13

Grami, B., Rasconi, S., Niquil, N., Jobard, M., Saint-Béat, B., Sime-Ngando, T., 2011. Functional effects of parasites on food web properties during the spring diatom bloom in lake pavin : A linear inverse modeling analysis. PLoS ONE 6.

Kiszka, J., Simon-Bouhet, B., Martinez, L., Pusineri, C., Richard, P., Ridoux,V., 2011, Ecological niche segregation within a community of sympatric dolphins around a tropical island, Marine Ecology Progress Series, 433, 273-288

Lassalle G, Lobry J, Le Loc’h F, Bustamante P, Certain G, Delmas D, Dupuy C, Hily C, Labry C, Le Pape O, Marquis E, Petitgas P, Pusineri C, Ridoux V, Spitz J, Niquil N (2011) Lower trophic levels and detrital biomass controlled the Bay of Biscay continental shelf food web : implications for ecosystem management. 91 : 561-575

Lebreton B, Richard P, Galois R, Radenac G, Pfléger C, Guillou G, Blanchard GF (2011) Trophic importance of microphytobenthos in an intertidal Zostera noltii seagrass bed : Evidence from stable isotope and fatty acid analyses. Estuarine Coastal and Shelf Science 92 : 140-153

Lebreton B, Richard P, Parlier EP, Guillou G, Blanchard GF (2011) Trophic ecology of mullets in an European salt marsh : A stable isotope study. Estuarine Coastal and Shelf Science 91 : 502-510

Lefebvre S, Mouget JL, Lavaud J (2011) Duration of rapid light curves for determining the photosynthetic activity of microphytobenthos biofilm in situ. Aquatic Botany 95:1-8

Marquis E, Niquil N, Dupuy C (2011). Does the study of nano-microzooplankton community size structure effectively define their dynamics ? Investigation in the Bay of Biscay (France). Journal of Plankton research 33 : 1104-1118.

Marquis E, Niquil N, Vézina A, Petitgas P, Dupuy C (2011) Influence of the planktonic food web structure on the system capacity to support pelagic productions : an inverse analysis approach. ICES Journal of Marine Science 68 : 803-812.

Morin, N., Lanneluc, I., Connil, N., Cottenceau, M., Pons, A.M., Sablé, S., 2011. Mechanism of bactericidal activity of microcin L in Escherichia coli and Salmonella enterica. Antimicrobial Agents and Chemotherapy 55, 997-1007.

Niquil, N., Kagami, M., Urabe, J., Christaki, U., Viscogliosi, E., Sime-Ngando, T., 2011. Potential role of fungi in plankton food web functioning and stability : A simulation analysis based on Lake Biwa inverse model. Hydrobiologia 659, 65-79.

Ory P, Palesse S, Delmas D, Montanié H (2011). In situ structuration of virioplankton through bacterial exoenzymatic activity : interaction with phytoplankton. Aquatic microbial ecology 64 : 233-252

Quaintenne G, van Gils JA, Bocher P, Dekinga A, Piersma T (2011) Scaling up ideals to freedom : are densities of red knots across Western Europe consistent with IFD ? Proceedings of the Royal Society Series B. 278 : 2728-2736 .

Refait, P., Nguyen, D.D., Jeannin, M., Sable, S., Langumier, M., Sabot, R., 2011. Electrochemical formation of green rusts in deaerated seawater-like solutions. Electrochimica Acta 56, 6481-6488.

Serodio J, Lavaud J (2011) A model for describing the light response of the nonphotochemical quenching of chlorophyll fluorescence. Photosynthesis Research 108 : 61-76.

Sime-Ngando, T., Niquil, N., 2011. Editorial : ’Disregarded’ microbial diversity and ecological potentials in aquatic systems : A new paradigm shift ahead. Hydrobiologia 659, 1-4.

Tortajada S, David V, Brahmia A, Dupuy C, Laniesse T, Parinet B, Pouget F, Rousseau F, Simon-Bouhet B, Robin FX (2011) Variability of salt- and freshwater marsh characteristics on the west coast of France : a spatio-temporal assessment. Water Research 45 : 4152-4168

Viain A, Corre F, Delaporte P, Joyeux E, Bocher P (2011) Numbers, diet and feeding methods of Common Shelduck Tadorna tadorna wintering in the estuarine bays of Aiguillon and Marennes-Oléron, western France. Wildfowl 61 : 121–141

2010

Allard J, Chaumillon E, Bertin X, Poirier C , Ganthy F (2010) Sedimentary record of environ-mental changes and human interferences in a macrotidal bay for the last millenaries : the Marennes-Oleron Bay (SW France). Bulletin de la Société Géologique de France 181 : 151-169

Brunet C and Lavaud J (2010) Can the xanthophyll cycle help extract the essence of the microalgal functional response to a variable light environment ? Journal of Plankton Research 32 : 1609-1617

Dupuy C, Rossignol L, Geslin E, Pascal PY (2010) Ammonia tepida : a hard-shelled foraminifera predator of mudflat at meio-macrofaunal metazoan. Journal of Foraminiferal Research 40 : 305-331

Feutry P, Hartmann HJ, Casabonnet H, Umaña G (2010) Preliminary analysis of the fish species of the Pacific Central American Mangrove of Zancudo, Golfo Dulce, Costa Rica. Wetlands Ecology and Management 18 : 637-650

Lavesque N., Bachelet G., Béguer M., Girardin M., Lepage M., Blanchet H., Sorbe J.-C., Modéran J., Sauriau P.-G., Auby I. (2010) Recent expansion of the oriental shrimp Palaemon macrodactylus (Crustacea : Decapoda) on the western coasts of France. Aquatic Invasions, 5 (Suppl. 1) : 103-108

Modéran J, Bouvais P, David V, Le Noc S, Simon-Bouhet B, Niquil N, Miramand P, Fichet D (2010) Zooplankton community structure in a highly turbid environment (Charente estuary, France) : Spatio-temporal patterns and environmental control. Estuarine, Coastal and Shelf Science 88 : 219-232

Ory P, Hartmann HJ, Jude F, Dupuy C, Del Amo Y, Catala P, Mornet F, Huet V, Jan B, Vincent D, Sautour B,Montanié H (2010) Pelagic food web patterns : Do they modulate virus and nanoflagellate effects on picoplankton during the phytoplankton spring bloom ? Environmental Microbiology 12 : 2755-2772

Pasquaud S., Pillet M., David V., Sautour B., Elie P.(2010) Determination of fish trophic levels in an estuarine system. Estuarine Coastal and Shelf Science, 86 p. 237 - p. 246

Pasquaud S, David V, Lobry J, Girardin M, Sautour B, Elie P (2010). Exploitation of trophic resources by fish under stressful estuarine conditions . Mar Ecol Prog Ser 400 : 207-219

Perkins RG, Lavaud J, Serodio J, Mouget J-L, Cartaxana P, Rosa P, Barille L, Brotas V, Jesus BM (2010) Vertical cell movement is a primary response of intertidal benthic biofilms to increasing light dose. Marine Ecology Progress Series 416:93-103.

Shamoun-Baranes J, Leyrer J, van Loon E, Bocher P, Robin F, Meunier F, Piersma T(2010) Stochastic atmospheric assistance and the use of emergency staging sites by migrants. Proc of the Royal Soc Biol
277 : 1505-1511

Pierre G, Graber M, Orvain F, Dupuy C, Maugard T (2010). Biochemical characterization of extracellular polymeric substances extracted from an intertidal mudflat using a cation exchange resin. Biochemical Systematics and Ecology 38 : 917–923

Poirier C., Sauriau P.-G., Chaumillon E., Bertin X., (2010). Influence of hydro-sedimentary factors on mollusc death assemblages in a temperate mixed tide-and-wave dominated coastal environment : implications for the fossil record. Cont. Shelf Res. 30 : 1876-1890

2009

Armynot du Chatelet E., Degré D., Sauriau P.-G., Debenay J.-P., (2009). Distribution of living benthic foraminifera in relation with environmental variables within the Aiguillon cove (Atlantic coast, France) : improving knowledge for paleoecological interpretation. Bull. Soc. Geol. Fr., 180 (2) : 93-104

Auguet JC, Montanié H, Hartmann HJ, Lebaron P, Casamayor E, Catala P, Delmas D (2009) Potential effect of freshwater virus on the structure and activity of bacterial communities in the Marennes-Oléron bay (France). Microbial ecology 57 : 295-306

Baeta A, Pinto R, Valiela I, Richard P, Niquil N, Marques JC (2009) 15N and 13C in the Mondego estuary food web : seasonal variation in producers and consumers. Marine Environmental Research 67 : 109-116

Baeta A, Valiela I, Pinto R, Richard P, Niquil N, Marques JC (2009) Eutrophication and trophic structure in response to the presence of the eelgrass Zostera noltii. Mar. Biol. 156 : 2107-2120

Bouchet VMP, Sauriau PG, Debenay JP, Mermillod-Blondin F, Schmidt S, Amiard JC, Dupas B (2009) Influence of the mode of macrofauna-mediated bioturbation on the vertical distribution of living benthic foraminifera : first insight from axial tomodensitometry. J. Exp. Mar. Biol. Ecol. 371 : 20-33

Callier MD, Fletcher RL, Thorp CH, Fichet D (2009) Macrobenthic community changes along a gradient of marina- related pollution at Southsea (South coast of England) and Minimes (West coast of France) marinas. J. mar. biol. assoc. UK. 89 : 19-29

Compton TJ, Troost TA, Drent J, Kraan C, Bocher P, Leyrer J, Dekinga A, Piersma T (2009) Repeatable sediment associations of burrowing bivalves acroos six european tidal flat systems Marine Ecology Progress Series 382 : 87–98

Dang C, de Montaudouin X, Savoye N, Caill-Milly N, Martinez P, Sauriau PG (2009) Stable isotopes changes in the adductor muscle of diseased bivalve Ruditapes philippinarum. Mar. Biol. 156 : 611-618

Dang C, Sauriau PG, Savoye N, Caill-Milly N, Martinez P, Haure J, Millaret C, de Montaudouin X (2009) Determination of diet in Manila clam Ruditapes philippinarum by spatial analysis of stable isotopes. Mar. Ecol. Prog. Ser. 387 : 167-177

De Corte D, Yokokawa T, Varela MM, Agogué H, Herndl GJ (2009) Spatial distribution of Bacteria and Archaea and amoA gene copy numbers throughout the water column of the Eastern Mediterranean Sea. The ISME Journal 3:147-158

Dubois S, Savoye N, Sauriau PG, Billy I, Martinez P, de Montaudouin X (2009) Digenean trematodes – marine mollusc relationships : a stable isotope study. Dis. Aquat. Org. 84 : 57-63

Johnson GA, Niquil N, Asmus H, Bacher C, Asmus R, Baird D (2009) The effects of aggregation on the performance of the inverse method and indicators of network analysis. Ecological Modelling 220 : 3448-3464

Lebreton B, Richard P, Radenac G, Bordes M, Bréret M, Arnaud C, Mornet F, Blanchard GF (2009) Are epiphytes a significant component of intertidal Zostera noltii beds ? Aquat. Bot. 91 : 82-90

Lefebvre S, Marin Leal JC, Dubois S, Orvain F, Blin J-L, Bataillé M-P, Ourry A, Galois R (2009) Seasonal dynamics of trophic relationships among co-occurring suspension feeders in two shellfish culture dominated ecosystems. Estuarine, Coastal and Shelf Science 82 : 415-425

Leyrer J, Bocher P, Robin F, Delaporte P, Meunier F, Joyeux E, Piersma T (2009) Northward migration of Afro-Siberian Knots Calidris canutus canutus : High variability in Red Knots numbers visiting stopover sites on French Atlantic coast (1979-2009). Wader Study Group Bulletin 116 : 145–151

Materna AC, Sturm S, Kroth PG, Lavaud J (2009) First induced plastid genome mutations in an alga with secondary plastids : psbA mutations in the diatom Phaeodactylum tricornutum (Bacillariophyceae) reveal consequences on the regulation of photosynthesis. Journal of Phycology 45 : 838-846

Pascal PY, Dupuy C, Richard P, Mallet C, Armynot du Chatelet E, Niquil N (2009) Seasonal variation in consumption of benthic bacteria by meio- and macrofauna in an intertidal mudflat. Limnology and Oceanography 54 : 1048-1059

Poirier C, Sauriau PG, Chaumillon E, Allard J (2009) Can molluscan assemblages give insights into Holocene environmental changes other than sea level rise ? A case study from a macrotidal bay (Marennes-Oléron, France). Palaeogeography, Palaeoclimatology, Palaeoecology 280 : 105-118

Quaintenne G, van Gils J A, Bocher P, Dekinga A, Piersma T (2009) Diet selection in a molluscivore shorebird across Western Europe : do they show short- or long-term intake rate-maximization ? J Anim Ecol doi : 10.1111/j.1365-2656.2009.01608

Shamoun-Baranes J., Leyrer J., van Loon E., Bocher P., Robin F., Meunier F., Piersma T. (2009) Stochastic atmospheric assistance and the use of emergency staging sites by migrants. Proceedings of the Royal Society Series B. 277 : 1505-1511

2008

Allard J, Chaumillon E, Poirier C, Sauriau PG (2008) Evidence of former Holocene sea level in the Marennes-Oléron Bay (French Atlantic coast). C.R. Geosciences 340 : 306-314

Bachelet G, de Montaudouin X, Desclaux C, Mairesse G, Raigné H, Randriambao K, Garcia-Meunier P, Martel C, Pascal P-Y, Sauriau PG, Simon-Bouhet B, Robert S Geairon P, Goulletquer P, Grangeré K, Guilpain P, Le Moine O, Rossi N, Seugnet JL, Soletchnick P, Thouzeau G, Paulet Y.-M, Richard J, Chlous-Ducharme F, Capitaine B, Boncoeur J, Alban F, Frésard M, Viard F, Bernas D, Cariou T, Daguin C, Dupont L, Jollivet D, Kruse I, McGlashan D (2008) Les Mollusques invasifs des bassins conchylicoles du littoral Manche-Atlantique : diversité et structure génétiques des populations invasives, compétition avec les taxons indigènes, gestions du risque pour les écosystèmes et la conchyliculture. Actes du Colloque de restitution du « Programme de recherche INVASIONS BIOLOGIQUES », Ministère de l’Ecologie, du Développement et de l’Aménagement durables (Eds.) : 193-200

Blanchet H, Lavesque N, Ruellet T, Dauvin JC, Sauriau PG, Desroy N, Desclaux C, Leconte M, Bachelet G, Janson A-L, Bessineton C, Duhamel S, Jourde J, Mayot S, Simon S, de Montaudouin X (2008) Use of biotic indices in semi-enclosed coastal ecosystems and transitional waters habitats. Implications for the implementation of the European Water Framework Directive. Ecol. Indic 8 : 360-372

Bouchet VMP, Sauriau P-G (2008) Influence of oyster culture practices and environmental conditions on the ecological status of intertidal mudflats in the Pertuis Charentais (SW France) : a multi-index approach. Marine Pollution Bulletin 56 : 1898-1912

Compton T., Troost T., van der Meer J, Kraan C, Honkoop P., Rogers D, Pearson G, de Goeij P, Bocher P, Lavaleye M, Leyrer J, Yates M, Dekinga A, Piersma T (2008) Distributional overlap rather than habitat differentiation
characterizes co-occurrence of bivalves in intertidal soft sediment systems. Mar Ecol Prog Ser 373 : 25–35

Faucher K., Fichet D., Miramand P., Lagardère, J.-P., (2008). Impact of chronic cadmium exposure at environmental dose on escape behaviour in sea bass (Dicentrarchus labrax L. ; Teleostei, Moronidae). Environmental pollution, vol. 151, no1 : 148-157

Herndl GJ, Agogué H., Baltar F., Reinthaler T., Sintes E., Varela M.M (2008) Regulation of aquatic microbial processes : the ‘microbial loop’ of the sunlit surface waters and the dark ocean dissected. Contribution to the SAME-10 Special Issue. Aquatic Microbial Ecology. 53 : 69-81

Lobry J, David V, Pasquaud S, Lepage M, Sautour B, Rochard E (2008) Diversity and stability of an estuarine trophic network. Marine Ecology Progress Series 358 : 13-25

Malet N, Sauriau P-G, Ryckaert M, Malestroit P, Guillou, G (2008) Dynamics and sources of suspended particulate organic matter in the Marennes-Oléron oyster farming bay : insights from stable isotopes and microalgae ecology. Est. Coast. Shelf Sci. 78 : 576-586

Obernosterer I, Catala P, Lami R, Caparros J, RasJ, Bricaud A, Dupuy C, van Wambeke F, Lebaron P (2008) Biochemical characteristics and bacterial community structure of the sea surface microlayer in the South Pacific Ocean. Biogeosciences 5 : 693–705

Pascal P-Y, Dupuy C, Richard P, Niquil N (2008) Bacterivory in the common foraminifer Ammonia tepida : Isotope tracer experiment and the controlling factors. Journal of Experimental Marine Biology and Ecology 359 : 55-61

Pascal P.Y., Dupuy C., Richard P., Rzeznik-Orignac J., Niquil N (2008) Bacterivory of a mudflat nematode community according to biotic and abiotic factors. Marine Biology 154 :671-682

Pascal P-Y, Dupuy C, Mallet C, Richard P, Niquil N (2008) Bacterivory by benthic organism in sediment : quantification using 15N enriched bacteria. Journal of Experimental Marine Biology and Ecology 355 : 18-26

Rzeznik-Orignac J, Richard P, Fichet D, Boucher G (2008) Food source and trophic position of intertidal nematodes and copepods unraveled by stable isotope analysis. Marine Ecology Progress Series 359 : 145-150

Urios L, Agogué H, Intertaglia L, Lesongeur F, Lebaron P (2008) Melitea salexigens gen. nov., sp. nov., a member of the class Gammaproteobacteria from the Mediterranean Sea. International Journal of Systematic and Evolutionary Microbiology 58 : 2479-2483

2007

Bocher P, Piersma T, Dekinga A, Kraan C, Yates M, Guyot T, Folmer E, Radenac G (2007) Site- and species- specific distribution patterns of molluscs at five intertidal soft-sediment areas in northwest Europe during a single winter. Marine Biology 151(2) : 401-484

Bouchet V, Debenay J-P Sauriau P-G (2007) First report of Quinqueloculina carinatastriata (Wiesner, 1923) (Foraminifera) along the French Atlantic coast (Marennes-Oléron Bay and Ile de Ré). Journal of Foraminiferal Research 37 : 204-212

Bouchet V, Debenay J-P, Sauriau P-G, Radford-Knoery J Soletchnik P (2007) Effects of short-term environmental disturbances on living benthic foraminifera during the Pacific oyster summer mortality in the Marennes-Oléron Bay (France). Marine Environmental Research 64 : 358-383

Couturier CS, Rouault A, McKenzie D, Galois R, Robert S, Joassard L, Claireaux G (2007) Effects of water viscosity upon ventilation and metabolism of a flatfish, the common sole Solea solea (L.). Marine Biology 152 : 803-814

Dupuy C, Ryckaert M, Le Gall S, Hartmann H J (2007) Seasonal variations of planktonic communities in Atlantic Coastal pond : importance of nanoflagellates. Microbial Ecology 53 : 537-548

Durieux EDH, Galois R, Bégout M-L, Sasal P, Lagardère F (2007) Temporal changes in lipid condition and parasitic infection by digenean metacercariae of young-of year common sole Solea solea (L.) in an Atlantic nursery ground (Bay of Biscay, France). Journal of Sea Research 57 : 162-170

Leguerrier D, Degré D, Niquil N (2007) Network analysis and inter-ecosystem comparison of two intertidal mudflat food webs (Brouage Mudflat and Aiguillon Cove, SW France). Estuarine, Coastal and Shelf Science 73 : 403-418

Malet N, Sauriau P-G, Faury N, Soletchnik P Guillou G (2007) Seasonality in trophic conditions and gametogenis, and d13C and d15N levels in diploid and triploid Pacific oysters Crassostrea gigas. Marine Ecology Progress Series 346 : 203-217

Marquis E, Niquil N, Delmas D, Hartmann HJ, Bonnet D, Carlotti F, Herbland A, Labry C, Sautour B, Laborde P, Dupuy C (2007) Planktonic food web dynamics related to phytoplankton bloom development on the continental shelf of the Bay of Biscay, French coast. Estuarine Coastal and Shelf Science 73 : 223-235

Orvain F, Sauriau P-G, Le Hir P, Guillou G, Cann Ph Paillard M (2007) Spatio-temporal variations in intertidal mudflat erodability : Marennes-Oléron Bay, western France. Continental Shelf Research 27 : 1153-1173

David V, Sautour B, Chardy P (2007) Successful colonization of the calanoid copepod Acartia tonsa in the oligomesohaline area of the Gironde estuary (SW France) Natural or anthropogenic forcing ? Estuarine Coastal and Shelf Science 71 : 429-442

David V, Sautour B, Chardy P (2007) The paradox between the long-term decrease of egg mass size of the calanoid copepod Eurythemora affinis and its long-term constant abundance in a highly turbid estuary (Gironde estuary, France). Journal of plankton Research 29 : 377-389

Herlory O, Richard P, Blanchard G (2007) Methodology of light response curves : application of chlorophyll fluorescence to microphytobenthic biofilm. Marine Biology 153 : 91-101

2006

Auguet JC, Montanié H, Lebaron P (2006) Structure of virioplankton in the Charente Estuary (France) : transmission electron microscopy versus pulsed field gel electrophoresis. Microbial Ecology 51 : 197-208

Dalto AG, Gremare A, Dinet A, Fichet D (2006) Muddy-bottom meiofauna responses to heavy metal and organic enrichment in New-Caledonia south-West Lagoon. Estuarine, coastal and Shelf Science 67 : 629-644

Degré D, Leguerrier D, Armynot du Chatelet E, Rzeznik J, Auguet JC, Dupuy C, Marquis E, Fichet D, Struski C, Joyeux E, Sauriau PG, Niquil N (2006) Comparative analysis of the food webs of two intertidal mudflats during two seasons using inverse modelling : Aiguillon cove and Brouage mudflat, France. Estuarine, coastal and Shelf Science 69 : 107-124

Faucher K, Fichet D, Miramand P, Lagardère JP, (2006) Impact of acute cadmium exposure on the trunk lateral line neuromasts and consequences on the “C-start” response behaviour of the sea bass (Dicentrarchus labrax L. ; Teleostei, Moronidae). Aquatic Toxicology, Volume 76, Issues 3-4 : 278-294

Jonsson P.R., van Duren L.A., Amielh M., Asmus R., Aspden R., Daunys D., Friedrichs M., Friend P.L., Olivier F., Pope, N., Precht E., Sauriau P.-G., Schaaff E., 2006. Making water flow : a comparison of the hydrodynamic characteristics of 12 different benthic biological flumes. Aquat. Ecol., 40 : 409-438

Joux F, Agogué H, Obernosterer I, Dupuy C, Reinthaler T, Herndl G, Lebaron P (2006) Microbial community structure in the sea surface microlayer at two contrasting coastal sites in the northwestern Mediterranean Sea. Aquatic microbial Ecology 42 : 91-104

Legrand H, Herlory O, Guarini J-M, Blanchard GF, Richard P (2006) Inhibition of microphytobenthic photosynthesis by the herbicides atrazine and diuron. Cahiers de Biologie marine 47 : 39-45

Leguerrier D, Bacher C, Benoît E, Niquil N (2006) A probabilistic approach of flow-balanced network based on Markov chains. Ecological Modelling 193 : 295-314

Niquil N, Bartoli G, Urabe J, Jackson GA, Legendre L, Dupuy C, Kumagai M (2006) Carbon steady-state model of the planktonic food web of Lake Biwa, Japan . Freshwater Biology 51 : 1570-1585

Niquil N, Kerleguer G, Leguerrier D, Richard P, Legrand H, Dupuy C, Pascal PY, Bacher C (2006) How would the loss of production due to an herbicide have repercussions in the food web of an intertidal mudflat ? Sensitivity analysis of an inverse model for Brouage mudflat, Marennes-Oléron Bay, France. Cahiers de Biologie marine 47 : 63-71

Orvain F, Sauriau P-G, Bacher C, Prineau M (2006) The influence of sediment cohesiveness on bioturbation effects due to Hydrobia ulvae on the initial erosion of intertidal sediments : a study combining flume and model approaches. Journal of Sea Research 55 : 54-73

Pigeot J, Miramand P, Guyot T, Sauriau PG, Fichet D, Le Moine O, Huet V. (2006) Cadmium pathways in an exploited intertidal ecosystem with chronic cadmium inputs (Marennes-Oléron, Atlantic coast, France). Mar. Ecol. Prog. Ser., Vol. 307 : 101–114.

Struski C, Bacher C (2006) Preliminary estimate of primary production by phytoplankton in Marennes-Oleron Bay, France. Estuarine, coastal and Shelf Science 66 : 323-334

Vigneron V, Solliec G, Montanié H, Renault T (2004) Detection of ostreid herpesvirus 1 (OsHV-1) DNA in seawater by PCR : influence of water parameters in bioassays. Diseases of aquatic Organisms 62 : 35-44

Jonsson PR, van Duren LA, Amielh M, Asmus R, Aspden R, Daunys D, Friedrichs M, Friend PL, Olivier F, Pope, N. Precht E, Sauriau P-G. Schaaff E (2006) Making water flow : a comparison of the hydrodynamic characteristics of 12 different benthic biological flumes. Aquatic Ecology 40 : 409-438

Longphuirt SN, Leynaert A, Guarini J-M, Chauvaud L, Claquin P, Herlory O, Amicea E, Huonnica P, Ragueneau O (2006) Discovery of microphytobenthos migration in the subtidal zone. Marine Ecology Progress Series 328 : 143-154

Rossignol L, Dupuy C, Pascal P-Y, Debenay JP (2006) Hydrobia ulvae : a cleaner of hard-shelled foraminifera. Journal of Foraminiferal Research 37 : 8-11

2005

Auguet JC, Montanié H, Delmas D, Hartmann HJ, Huet V (2005) Dynamic of virioplankton abundance and its environmental control in the Charente Estuary (France). Microbial Ecology 50 : 337-349

Armynot du Chatelet E., Debenay J.-P., Degré D., Sauriau P.-G., 2005. Utilisation des foraminifères benthiques comme indicateurs de paléo-niveaux marins ? Etude du cas de l’anse de l’Aiguillon. C. R. Palevol., 4 (1-2) : 209-223

Chauvaud L, Lorrain A, Dumbar RB, Paulet YM, Touzeau G, Jean F, Guarini JM, Mucciaronne D (2005) Shell of the great scallop Pectem maximus as a high-frequency archive of paleoenvironmental changes. Geochemistry Geophysics Geosystems 6 : 1-15

Collos Y, Descolas-Gros C, Mornet F (2005) Grazing affects carbon fixation pathways by phytoplankton in coastal marine ecosystems. Chemistry and Ecology 21 : 503-509

Gohin F, Loyer S, Lunven M, Labry C, Froidefond JM, Delmas D, Huret M, Herbland A (2005) Satellite-derived parameters for biological modelling in coastal waters : illustration over the eastern continental shelf of the Bay of Biscay. Remote Sensing of Environment 95 : 29-46

Haubois A-G, Guarini JM, Richard P, Fichet D, Radenac G, Blanchard GF (2005) Ingestion rate of the deposit-feeder Hydrobia ulvae (Gastropoda) on epipelic diatoms : effect of cell size and algal biomass. Journal of experimental marine Biology and Ecology 317 : 1-12

Haubois AG, Sylvestre F, Guarini JM, Richard P, Blanchard GF (2005) Spatio-temporal structure of the epipelic diatom assemblage from an intertidal mudflat in Marennes-Oléron Bay, France. Estuarine, coastal and Shelf Science 64 : 385-394

Herlory O, Blanchard GF, Planche S, Huet V, Richard P (2005) Does the size of the microphytobenthic biofilm on intertidal mudflats depend on the available photosynthetic biomass ?. Marine Ecology Progress Series 298 : 95-100

Labry C, Delmas D, Herbland H (2005) Phytoplankton and bacterial alkaline phosphatase activities in relation to phosphate and DOP availability within the Gironde plume waters (Bay of Biscay). Journal of experimental marine Biology and Ecology 318 : 213-225

Martin S, Clavier J, Guarini JM, Chauvaud L, Hily C, Grall J, Thouzeau G, Jean F, Richard J (2005) Comparison of Zostera marina and maerl community metabolism. Aquatic Botany 83 : 161-174

Sokolowski A, Richard P, Fichet D, Radenac G (2005) Cd transfer in the deposit-feeder Prosobranch Hydrobia ulvae (Pennant) from benthic diatoms : the kinetics of rapid Cd assimilation and efflux. Journal of experimental marine Biology and Ecology 317 : 159-174

2004

Agogué H. Casamayor EO, Joux F, Obemosterer I, Dupuy C, Lantoine F, Catala P, Weinbauer MG, Reinthaler T, Herndl GJ, Lebaron P (2004) Comparison of samplers for the biological characterization of the sea surface microlayer. Limnology and Oceanography Methods 2 : 213-225

Audemard C., Sajus M.-C., Barnaud A., Sautour B., Sauriau P.-G., Berthe F.J.C., 2004. Infection dynamics of Marteilia refringens in flat oyster Ostrea edulis and copepod Paracartia grani in a claire pond of Marennes-Oléron Bay. Dis. Aquat. Org., 61 : 103-111

Bachelet G., Simon-Bouhet B., Desclaux C., Garcia-Meunier P., Mairesse G., de Montaudouin X., Raigné H., Randriambao K., Sauriau P.-G., Viard F., 2004. Invasion of the eastern Bay of Bis-cay by the nassariid gastropod Cyclope neritea : origin and effects on resident fauna. Mar. Ecol. Prog. Ser., 276 : 147-159

Guarini J-M, Gros P, Blanchard GF, Richard P, Fillon A (2004) Benthic contribution to pelagic microalgal communities in two semi-enclosed, european-type littoral ecosystems (Marennes-Oléron Bay and Aiguillon Bay, France). Journal of Sea Research 52 : 241-258

Herlory O, Guarini JM, Richard P, Blanchard GF (2004) Microstructure of microphytobenthic biofilm and its spatio-temporal dynamics in an intertidal mudflat (Aiguillon Bay, France). Marine Ecology Progress Series 282 : 33-44

Hust J., Frydenberg J., Sauriau P.-G., Le Gall P., Mouritsen K.N, Jensen K.T., 2004. Use of ITS rDNA for discriminating of larval stages of two microphallid (Digenea) species using Hydrobia ulvae (Pennant, 1777) and Corophium volutator (Pallas, 1766) as intermediate hosts. Parasitol. Res., 93 (4) : 304-310

Radenac G, Coteur G, Danis B, Dubois P, Warnau M (2004) Measurement of EROD activity : Caution on spectral properties of standards used. Marine Biotechnology 6 : 307-311

Rzeznik-Orignac J, Fichet D, Boucher G (2004) Extracting massive numbers of nematodes from muddy marine deposits : efficiency and selectivity. Nematology 6 (part 4) : 605-616

Martel C, Guarini JM, Blanchard G, Sauriau PG, Trichet C, Robert S, Garcia-Meunier P (2004) Invasion by the marine gastropod Ocinebrellus inornatus in France. III. Comparison of biological traits with the resident species, Ocenebra erinacea. Marine Biology 146 : 93-102

Orvain F., Sauriau P.-G., Sygut, A., Joassard, L., Le Hir P., 2004. Interacting effects of Hydrobia ulvae bioturbation and microphytobenthos on the erodability of mudflat sediments. Mar. Ecol. Prog. Ser., 278 : 205-223


Liste des publications des chercheurs de l’équipe BIOFEEL référencées sous HAL :

4 résultats

2018

Article dans une revue

Zeaxanthin from Porphyridium purpureum induces apoptosis in human melanoma cells expressing the oncogenic BRAF V600E mutation and sensitizes them to the BRAF inhibitor vemurafenib
Camille Juin , Raimundo Gonçalves de Oliveira Junior , Audrey Fleury , Chloé Oudinet , Lior Pytowski , Jean-Baptiste Bérard , Elodie Nicolau , Valérie Thiéry , Isabelle Lanneluc , Laureen Beaugeard , Grégoire Prunier , Jackson Roberto Guedes da Silva Almeida , Laurent Picot
Revista Brasileira de Farmacognosia, 2018, 28 (4), pp.457-467. ⟨10.1016/j.bjp.2018.05.009⟩

Communication dans un congrès

PAMELi, un drone marin de surface au service de l’interdisciplinarité
Thibault Coulombier , Valérie Ballu , Philippe Pineau , Nicolas Lachaussée , Etienne Poirier , Antoine Guillot , Michel Calzas , Christine Drezen , Lionel Fichen , Christine Plumejeaud-Perreau , Vincent Lefouest , Isabelle Brenon , Xavier B Bertin , Guy Woppelmann , Laurent Testut
Journées Nationales Génie Côtier - Génie Civil, May 2018, La Rochelle, France. pp.337-344, ⟨10.5150/jngcgc.2018.038⟩

2014

Article dans une revue

Novel nonribosomal peptide synthetase (NRPS) genes sequenced from intertidal mudflat bacteria
Fatoumata Tambadou , Isabelle Lanneluc , Sophie Sablé , Géraldine Klein , Ibtissem Doghri , Valérie Sopena , Sandrine Didelot , Cyrille Barthélémy , Valérie Thiéry , Romain Chevrot
FEMS Microbiology Letters, 2014, pp.n/a-n/a. ⟨10.1111/1574-6968.12532⟩

2011

Article dans une revue

Antiproliferative Activity of Violaxanthin Isolated from Bioguided Fractionation of Dunaliella tertiolecta Extracts
Virginie Pasquet , Perrine Morisset , Saïd Ihammouine , Amandine Chepied , Lucie Aumailley , Jean-Baptiste Bérard , Benoît Serive , Raymond Kaas , Isabelle Lanneluc , Valérie Thiéry , Mathieu Lafferriere , Jean-Marie Piot , Thierry Patrice , Jean-Paul Cadoret , Laurent Picot
Marine drugs, 2011, 9 (5), pp.819-831. ⟨10.3390/md9050819⟩
publie le mercredi 20 décembre 2023